Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2766 ATGGCTTATTCTATTGGCATTAACAGTATGCTGATTGGAGTCATGATAATTAGCTCCTTGGTAGCTACATGTTCTGCTAACTTCAACCAAGACTTTGATCTAACTTGGGGTGACCACCGTGCTAAGATATTCAATGGTGGTCAACTTCTATCTCTTTCTCTTGATAAAACTTCTGGCTCTGGCTTCCAATCCAAGAAAGAGTATTTATTTGGTAGAATTGATATGCAACTTAAACTTGTTGCTGGAAATTCTGCTGGAACTGTTACTGCTTACTATTTGTCATCACAGGGACCGACTCATGATGAAATTGATTTTGAGTTCTTAGGAAATGTTAGTGGCGATCCTTACATTCTCCACACAAACGTGTTTTCTCAAGGCAAAGGAAACAGAGAACAACAATTCTACCTCTGGTTCGACCCAACCAAGAACTTCCACACTTACTCTATCATCTGGAAGCCACAACACATTATATTTTTGGTTGACAACACCCCAATAAGGATCTTCAAGAATGCTGAATCAATTGGTATTCCATTCCCAAAGAACCAACCAATGAGAATCTATTCAAGTCTCTGGAATGCTGATGATTGGGCTACAAGAGGTGGTTTGGTGAAAACTGATTGGTCCAAAGCACCCTTTACAGCTTACTACCGCAATTTCAAAGCTACTGAGTTATCTTCTGTCTCTTCCACTTCCTTCTCTGATTCTGCATTGCAAAGCAATGAGCTTGATGCTTATGGTAGAAGAAGATTGAGATGGGTTCAGAAATACTTTATGATCTATAATTACTGCAACGATCTTAAGCGATTCCCAGAAGGTATTCCTGCTGAGTGTAAGCGTCCAAGGTTCTGA 849 0.3981 MAYSIGINSMLIGVMIISSLVATCSANFNQDFDLTWGDHRAKIFNGGQLLSLSLDKTSGSGFQSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGDPYILHTNVFSQGKGNREQQFYLWFDPTKNFHTYSIIWKPQHIIFLVDNTPIRIFKNAESIGIPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATELSSVSSTSFSDSALQSNELDAYGRRRLRWVQKYFMIYNYCNDLKRFPEGIPAECKRPRF* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2766 282 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 237 277 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mtr3g2766 282 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 15 9 280 - -
Mtr3g2766 282 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 9 280 IPR044791 GO:0004553
Mtr3g2766 282 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 280 IPR013320 -
Mtr3g2766 282 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 22 216 IPR000757 GO:0004553|GO:0005975
Mtr3g2766 282 Pfam Glycosyl hydrolases family 16 29 209 IPR000757 GO:0004553|GO:0005975
Mtr3g2766 282 ProSitePatterns Glycosyl hydrolases family 16 active sites. 102 112 IPR008263 GO:0004553|GO:0005975
Mtr3g2766 282 Gene3D - 13 281 - -
Mtr3g2766 282 CDD GH16_XET 25 277 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mtr3g2766 282 PIRSF EndGlu_transf 1 282 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2766 Mtr-Chr3 41661061 41662456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2766 7 281 Glycoside Hydrolase AT3G23730 72.028 1.56e-164 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2766 K08235 - gmx:100499905 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2766 3 41661061 41662456 Mtr3g2766 3 41661061 41662456 ECH