Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2760 ATGTCAACGATTCCCTTCACTTCCAAATGCAACAACTATACTTCTTCAACCTTCTTCTCCTATTCTCTTCCTCTCCTCTTTCCTCGCCACAGCTTCACCACTTCTATCAACCTTTCTCGAACTCGTATCTTTTGCCAATCTCAATCCAAGATAAGAAGGTTCTCCCCTTTATTAGAAAGTTCATTGCTTTCTGGTAATGATGGTGTCGTCTCGGATGAGTGGAAAACAGTTCCTGATATTTGGAGAAGTTCTGCTGAGAAGTATGGTGATAAAATTGCTCTCATAGATCCATATCATGATCCTCCTTCAACTATGACTTACAAACAGTTGGAGGATGCAATATTGGACTTTGCTGAGGGCTTGAGAGTTATTGGAGTAAGTCCCAATGAAAAGATTGCGCTTTTTGCTGATAATTCTTGTCGCTGGCTTGTGGCAGATCAAGGTATGATGGCAACCGGAGCAATCAATGTTGTTAGGGGTTCAAGGTCATCAATTGAAGAACTGCTGCAAATATACAACCACTCTGAAAGCATTGCACTAGCTGTGGATAATCCAGAAATGTTTAATCGGATTGCAAAAGCGTTTGATTTGAAGGCTTCAATGAGATTTGTTATTCTGCTGTGGGGAGAAAAATCATGCCTGGTCAATGAAGGAAGCAAGGAAGTGCCAATTTTTACATTCACGGAAATCATGCATTTGGGACGAGGGAGCCGCAGGTTGTTTGAATCCCATGATGCTAGGAAGCACTATGTGTTTGAAGCAATAAAATCTGATGACATTGCTACTCTTGTATACACAAGTGGTACTACTGGAAATCCAAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATTAAATTTTATTCGGACATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGTATGCTGCCTCCTTGGCATGCATATGAAAGAGCTTGTGAGTATTTCATTTTTTCATGCGGTGTTGACCAAGTATATACAACTGTGAGAAACTTGAAGGATGATTTGGAGCGTTACCAGCCGCATTACTTGATTTCTGTTCCTTTAGTTTATGAATCGTTGTACAGTGGGATCCAGAGGCAGATTTCTACGAGCTCCCTTGTTAGAAAGCTTGTTGCACTGACATTCATCAGGGTCAGCTTAGGGTACATGGAATGTAAGCGGATTTATGAGGGTAAATGTTTAACCAAGAACCAGAAGTCGCCTTCGTATCTCTATGCAATGTTGGATTGGCTAGGGGCAAGAATTATTGCCACAATATTATTTCCAATTCATATGCTGGCAAAGAAACTTGTCTACAGTAAAATCCATTCAGCTATTGGATTCTCTAAGGCTGGAATAAGTGGTGGTGGTAGCTTACCTTCTCACGTCGATAGGTTTTTCGAGGCAATTGGTGTGACATTGCAGAACGGATATGGTTTAACAGAAACTTCACCAGTTATTGCTGCTCGACGACTTAGTTGTAATGTTATCGGATCTGTCGGGCATCCACTTAAGCATACAGAGTTTAAAGTTGTAGATTCTGAAACTGGTGAAGTTCTTCCACCTGGTTATAAGGGAATTTTGAAAGTCAGGGGCCCACAATTGATGAAGGGATACTACAAGAATCCTTCAGCCACAAATCAGGCCATAGACAAGGATGGCTGGCTGAATACTGGTGACATAGGTTGGATTGCTGCCTACCATTCATCTGGACGGAGTCGTAATTGTGGCGGTGTGATTGTTGTTGAAGGTCGTGCTAAAGACACCATTGTGCTTTCATCAGGTGAAAATGTTGAACCGGTAGAACTTGAAGAAGCTGCGATGAGGAGTAGTCTCATACAACAAATTGTTGTCATTGGCCAGGATAAGCGACGTCTAGGAGCTGTAGTTGTTCCCAACAAAGAAGTCTTAAAGGCAGCAAGGGAATTGTCAATTATAGATTCCAATAGTTCAGATCTCAGTCAGGAAAATGTGACCAGTCTGATATATAATGAATTAAGGACCTGGACGTCCGAGTTTCCATTTCAAATTGGGCCAATCCTTCTCGTAAATGATCCCTTCACGATTGATAATGGGCTAATGACACCCACAATGAAAATTCGAAGGGATAGAATTATGGCTCAATACAAGGAGCAAATAGAGAATCTATACAAGTAA 2148 0.4125 MSTIPFTSKCNNYTSSTFFSYSLPLLFPRHSFTTSINLSRTRIFCQSQSKIRRFSPLLESSLLSGNDGVVSDEWKTVPDIWRSSAEKYGDKIALIDPYHDPPSTMTYKQLEDAILDFAEGLRVIGVSPNEKIALFADNSCRWLVADQGMMATGAINVVRGSRSSIEELLQIYNHSESIALAVDNPEMFNRIAKAFDLKASMRFVILLWGEKSCLVNEGSKEVPIFTFTEIMHLGRGSRRLFESHDARKHYVFEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKFYSDIVPAEVGDRFLSMLPPWHAYERACEYFIFSCGVDQVYTTVRNLKDDLERYQPHYLISVPLVYESLYSGIQRQISTSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKNQKSPSYLYAMLDWLGARIIATILFPIHMLAKKLVYSKIHSAIGFSKAGISGGGSLPSHVDRFFEAIGVTLQNGYGLTETSPVIAARRLSCNVIGSVGHPLKHTEFKVVDSETGEVLPPGYKGILKVRGPQLMKGYYKNPSATNQAIDKDGWLNTGDIGWIAAYHSSGRSRNCGGVIVVEGRAKDTIVLSSGENVEPVELEEAAMRSSLIQQIVVIGQDKRRLGAVVVPNKEVLKAARELSIIDSNSSDLSQENVTSLIYNELRTWTSEFPFQIGPILLVNDPFTIDNGLMTPTMKIRRDRIMAQYKEQIENLYK* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2760 715 ProSitePatterns Putative AMP-binding domain signature. 263 274 IPR020845 -
Mtr3g2760 715 Gene3D - 447 490 - -
Mtr3g2760 715 CDD LC_FACS_like 100 702 - -
Mtr3g2760 715 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 1 715 - -
Mtr3g2760 715 Pfam AMP-binding enzyme 83 589 IPR000873 -
Mtr3g2760 715 Gene3D - 71 384 IPR042099 -
Mtr3g2760 715 SUPERFAMILY Acetyl-CoA synthetase-like 64 714 - -
Mtr3g2760 715 Gene3D - 585 713 IPR045851 -
Mtr3g2760 715 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 1 715 - -
Mtr3g2760 715 Gene3D Luciferase; Domain 3 491 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2760 Mtr-Chr3 41574664 41584548 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2760 6 715 Acyl Lipid Metabolism Gene Families AT3G23790 66.434 0.0 1012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2760 K01897 - gmx:100782583 1179.85