Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2750 ATGAGTACGGTCGACAAGATGCTGATCAAAGGCATCCGAAGTTTCGACCCGGAAAACAAGAACGTCATCACCTTCTTCAAACCCTTAACCCTAATCGTCGGTCCCAACGGTGCCGGCAAAACCACGATCATTGAATGCTTGAAGCTTTCTTGCACCGGTGAGTTACCTCCTAATGCTAGGTCTGGTCACAGCTTCATTCACGACCCCAAGGTTGCGGGAGAAACCGAAACCAAGGGACAGATTAAGCTCCGGTTCAAAACCGCTGCCGGTAGAGACGTGGTTTGCATAAGGTCATTTCAACTCACTCAAAAAGCATCTAAGATGGAATACAAAGCAATTGAGAGTGTGCTTCAAACTATTAATCCTCATTCCGGCGAGAAAGTTTGCCTTAGCTATAGATGTGCTGACATGGATCGAGAGATTCCTGCACTCATGGGTGTTTCGAAGGCCATTTTGGAAAATGTTATATTCGTTCATCAAGATGAAGCAAATTGGCCACTTCAAGATCCTTCCACGTTAAAGAAGAAGTTTGATGACATCTTTTCCGCAACTCGATACACAAAGGCACTTGAGGTTATAAAGAAACTTCACAAGGATCAAGCTCAAGAGATAAAGACTTACAAGCTGAAACTGGAAAATCTTCAAACTCTGAAAGATGCGGCTTACACGCTTCGGGAAAACATCACACATGATCAAGAGAAAGCAGAATCTCTAAAAGATCAGATACAGCAGTTGGATGGAAGCATTAAAGATTTGGACGCTAAAATTGATCATGTGGATAAAACATTGAAACATTTGCTGGAGCTAAAGGGGCAAATATCAAGTAAAACTACAGAACGAAGCACTCTATTTAGGTCACAACAGAAGCAATATTCTGACCTTGAGGAGGAGTTTGAAGAACCTGATGAGGAGTTGATGGAATCGAAGACCAAGTTTGATGAAAAGATTGCAAATTCACAAACACAAATAAGCAAGTTGGATAGAGAGAAGTCTGACATTAACACAAAATTTCCTGTCCTTAAGAAGACCATCGATAACTCCATCTGGGAGATCAGCAAGCTACAAACTGAAGCAGAAGCTCACATGTCTCTGAGGAGTGAACGAGATAGTTGCATTAAAAATATTTTTGATAGGTATAACTTGGGATCTCTTCCAAAGCCACCCTTCAGTGCTGAGGATGCTTTGAACCTCACTAATCGTGTAAAATCAAGGTTGGGGGATCTTGAGAAGGATCTTGAAGATAAAAAGAATGCAAATAACACTGAACTCAAGATGGCATGGGATTGCTACTTAAATGCAAATGAAAGTTGGCAAAATACTGAAGCTAAAATACAAACTAAGAGAGAGCACAAGGCTGGCATTATAAAGCGCATTGAAGAGAAGAAAAATGAGCTTGAGTCATTCGAACTTGAAATATCTAATATAGATGTTTCTCATTTAGACGAGAGAGAAAGAGAATTGCAAATTCGTCTGGAGGGGAAGATCAAACAACGTGATGAAAGAGAATTTGAACTAAAGAAAAGTGAAATCGAAAATAAAGCCCTTAATGTGGAGCAAAAGATTAGAGCTCTCAATCGAGAGATGCTTACAATGGCTACTGATTCAAAGGAAAGAGAAAAATTATCTCTTATGAAGGGAGACTTGGAGACAAAGAAGAAGCAACATAAAAAGATAATTGATGACCAAAAAGATAAAATAAGAAGGGTGCTAAAAGGGAGGATTCCTTCTGATAAGGACCTGAAGAAGGAAATCACACAAGCATTAAGGACTGTTGTAGCTGAGTTTGATGATCTGAATGCTAAGTATCGAGAAGCTGACAAGGAAGTAAATGTTTTGCAGATGAAAGTACAAGAAGCAGACAATAACTTATCTAAACACCAAAAGGATATGTCATCAAGAAAGAAATTTATCGAATCCAAGCTTCAGTCTTTGGACCAGCAAGGCTCTGGAATCGATTCTTATCTAAAAGTTTTAGAGTCTGCCAAGGAGAAAAGAGATGTACAGAAAAGCAAATATAACATTGCAGATGGTATGCGACAAATGTTTGATCCTTTTGAAAGGGTTGCAAGAGCACATCATTTTTGCCCTTGCTGTGAGCGTTCTTTCTCGGCAGAAGAAGAAGACAGTTTTGTCAAGAAGCAAAGAGGGAAGGCTGCTAGTTCAGCTGAACATTTGAAAATTCTTGCTGTGGAGTCCTCAAGTGCAGACTCTGATTATCAGCAGTTGGAGAAGCTTCGTATATGGTATGAAGAATATGTTAAACTTAGCAAGGAGACAATCCCCAATGCTGAAAAGGAACTCCAGCAAGTCAAGGAAGAGCTGGATCACAAATCCCAGGCACTTGACGATGTTTTAGGTATTTTAGCTCAAGTGAAGACTGACAAGGAGTTGGTTGAGCCGGTGGTGAAATATGTTGAACATGCTGATCGAATTTTCCTCGAAATTCAAACTTTGCAAAAGAAAGTTGAGGATTTAGAAAGTGAGCTTGGTTGTGGAGGACCAGAAGTGAGGACTCTAGAAGAAATTCAATTGGAGCTCGTTGCATTGCAGGGAACAAAGGACAATTTGCATACTGAGTTGACGAATTTGATGGATGAGCAGAGGAATATGGATACTGATATATCAGGTATTCAATCACGGTTGCAGAATGCAAGGGCTGATAAAATGAATGCAGCTATGAAATTGCAAGATGTAAAAAGATTAGAAGAAGAATTAGAACGATTGACAGAAGAAATGACCCAAGTTGATCTTGATGAGAAGAGTCTCACGGAAGCCTTTGGACCTTTATCCAAGCGCAAAGATAAAATACGTGCTGACTATAATGAATTGAAACTTAGACTTGACCACGAGTTTGAGAATCTGGTTGAAAAAAAAAGAATTTATCAGCAAGAAGCTGAAGCAGTTTTTGGAATGACTTCTAAGATCAAAGAGTACTCTAACTCAAAGAAAGGAGACAGGTTGAAGGAGCTGCAGGAAAAGAAATCTCTATTAGAATCTCAACTGCAAAGTTGTGAAACCAGGATGCAGGAAATTATAGATGAACTAGACAAAAGGAAAGATTTGTTGCGAAATACTGATTTGCTTAGAAGAAAAATTGAGGACAATTTAAATTACAGAAAAACAAAGGCTGAAGTAGATGAGCTTGAACATGAAATTGAAATACTTGAAGAAAATATGTTGAAGATTGGTGTATCTGACACAATTCAAACCGAACACCAGAAATTATCCCAGGACAGGCAGAGGCTTCTTTCGGAGTCAAACAGGTGCAAAGGAACAATAGATGTTTACCAAAGCAATATTTCCAAAAATAAGATTGATCTTAAGCAGGCCCAATACAAGGACATAGATAAGCGATATTTTGATCAGCTTATCCAGCTTAAGACAACTGAAATGGCAAACAAAGACCTGGACAGATACTACAATGCACTTGACAAAGCACTGATGCGATTCCACACAATGAAAATGGAAGAAATCAACAAAATTATAAGAGAATTGTGGCAACAGACTTATAGAGGACAGGATATTGACTGCATTAGTATTCATTCTGATTCCGAAGGTGGTGGTACCCGATCCTACAGTTACAAGGTTCTCATGCAGACTGGTGATGCTGAGTTAGAAATGAGAGGAAGATGTAGTGCAGGACAGAAGGTACTGGCATCTCTCATCATACGGTTGGCTTTAGCGGAAACGTTTTGCCTCAATTGTGGAATTCTTGCATTGGATGAGCCAACCACAAATTTGGATGGTCCAAATGCTGAAAGTCTGGCTGCGGCTATCCTGAGGATCATGGAGGACAGGAAAAGCCAGGAAAATTTTCAGCTAATTGTAATTACTCATGACGAGCGTTTTGCTCAACTGATTGGTCAGCGCCAGCATGCGGAGAGATATTATCGAGTCGCAAAAGATGACCATCAGCACAGTATAATCGAATCTCAGGAGATATTCGACTGA 3951 0.3969 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGRDVVCIRSFQLTQKASKMEYKAIESVLQTINPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYTLRENITHDQEKAESLKDQIQQLDGSIKDLDAKIDHVDKTLKHLLELKGQISSKTTERSTLFRSQQKQYSDLEEEFEEPDEELMESKTKFDEKIANSQTQISKLDREKSDINTKFPVLKKTIDNSIWEISKLQTEAEAHMSLRSERDSCIKNIFDRYNLGSLPKPPFSAEDALNLTNRVKSRLGDLEKDLEDKKNANNTELKMAWDCYLNANESWQNTEAKIQTKREHKAGIIKRIEEKKNELESFELEISNIDVSHLDERERELQIRLEGKIKQRDEREFELKKSEIENKALNVEQKIRALNREMLTMATDSKEREKLSLMKGDLETKKKQHKKIIDDQKDKIRRVLKGRIPSDKDLKKEITQALRTVVAEFDDLNAKYREADKEVNVLQMKVQEADNNLSKHQKDMSSRKKFIESKLQSLDQQGSGIDSYLKVLESAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHFCPCCERSFSAEEEDSFVKKQRGKAASSAEHLKILAVESSSADSDYQQLEKLRIWYEEYVKLSKETIPNAEKELQQVKEELDHKSQALDDVLGILAQVKTDKELVEPVVKYVEHADRIFLEIQTLQKKVEDLESELGCGGPEVRTLEEIQLELVALQGTKDNLHTELTNLMDEQRNMDTDISGIQSRLQNARADKMNAAMKLQDVKRLEEELERLTEEMTQVDLDEKSLTEAFGPLSKRKDKIRADYNELKLRLDHEFENLVEKKRIYQQEAEAVFGMTSKIKEYSNSKKGDRLKELQEKKSLLESQLQSCETRMQEIIDELDKRKDLLRNTDLLRRKIEDNLNYRKTKAEVDELEHEIEILEENMLKIGVSDTIQTEHQKLSQDRQRLLSESNRCKGTIDVYQSNISKNKIDLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDCISIHSDSEGGGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAILRIMEDRKSQENFQLIVITHDERFAQLIGQRQHAERYYRVAKDDHQHSIIESQEIFD* 1317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2750 1316 Coils Coil 881 925 - -
Mtr3g2750 1316 Coils Coil 980 1014 - -
Mtr3g2750 1316 Coils Coil 235 255 - -
Mtr3g2750 1316 Coils Coil 808 828 - -
Mtr3g2750 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 1286 IPR027417 -
Mtr3g2750 1316 Coils Coil 500 527 - -
Mtr3g2750 1316 Coils Coil 398 418 - -
Mtr3g2750 1316 Gene3D - 810 983 - -
Mtr3g2750 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 299 IPR027417 -
Mtr3g2750 1316 Pfam AAA domain 7 250 IPR038729 GO:0140664
Mtr3g2750 1316 Coils Coil 588 629 - -
Mtr3g2750 1316 Coils Coil 1031 1065 - -
Mtr3g2750 1316 Pfam AAA ATPase domain 934 1283 IPR041685 -
Mtr3g2750 1316 Coils Coil 839 866 - -
Mtr3g2750 1316 CDD ABC_Rad50 4 170 IPR045171 -
Mtr3g2750 1316 PANTHER RAD50 1 1314 - -
Mtr3g2750 1316 TIGRFAM rad50: rad50 3 1310 IPR004584 GO:0000723|GO:0005634|GO:0006281|GO:0016887|GO:0030870
Mtr3g2750 1316 Gene3D - 1022 1315 IPR027417 -
Mtr3g2750 1316 Coils Coil 197 217 - -
Mtr3g2750 1316 CDD ABC_Rad50 1205 1308 IPR045171 -
Mtr3g2750 1316 Coils Coil 451 478 - -
Mtr3g2750 1316 Gene3D - 4 305 IPR027417 -
Mtr3g2750 1316 Coils Coil 753 780 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2750 K10866 - gmx:100818545 1944.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2750 3 41500263 41513867 Mtr3g2750 3 41500263 41513867 ECH