Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2742 ATGGCTTCTCCACCAGACACAAGCAAAACCATAAAGCTTGAACGTTACAACAGCTACATCAGAAAAGTTAACAGCACTAAACTCCTTAACGCTTCTTCCAAACTTCTCTTCCGTGCCACACTTTTAATAGCACTTGTTCTTGTTTTCTTCTTCACCTTCAATTATCCACCACTCTCCGACTCCACCAACCACCACTTCCACACACACTCCCACTTCCTCACCTCCGCATTCGGCGGTGGTGGAGCATGGGAAAGACATGTCCGTCACTCCGCCATTCCCCGTCGTCCTAATGGTTTCACCGTTCTTGTCACCGGCGCAGCTGGTTTCGTCGGTTCACACTGTTCCCTCGCTCTTAAAAAGCGCGGCGACGGTGTTATCGGTTTAGACAATTTCAACAGCTATTATGATCCATCTTTGAAACGCGCTCGTCAAGCTTTGTTAACTCAGCATCAAATCTTCATAGTAGAAGGTGATTTAAACGACGCGCCATTATTAACAAAACTCTTCGACGTTGTTCCGATCACCCACATCCTTCACCTCGCAGCACAAGCCGGAGTTCGTTACGCAATGCAAAATCCACAATCTTACATCAAATCCAACATTGCTGGTTTCGTTAACCTTCTAGAAGTTTCCAAAGCCGCAAATCCTCAACCAGCGATAGTTTGGGCTTCATCAAGCTCCGTTTACGGTCTCAACACTGAAAATCCATTCTCCGAACTTCACCGGACAGATCAACCGGCGAGTCTCTACGCCGCAACTAAAAAAGCCGGCGAAGAAATCGCACATACTTACAATCACATCTACGGTCTCTCCCTCACCGGACTCCGATTCTTCACCGTCTACGGTCCTTGGGGAAGACCAGACATGGCATACTTTTTCTTCACCAAAGATATTCTCCACGGAAAAACGATCGATGTTTACCAGACACAAGAAGGTAAAGAAGTGGCGCGTGATTTCACGTATATCGATGATATCGTTAAAGGTTGTGTAGGAGCGTTGGATACGGCGGAGAAAAGTACTGGAAGCGGAGGAAAGAAAAAAGGACCGGCGCAGTTAAGAATTTACAATCTCGGAAACACATCGCCGGTGCCGGTGGGTAAACTTGTTTCGATTCTTGAGAATTTGTTAAGTACGAAAGCGAAGAAGCATATAATTAAGATGCCGCGAAACGGTGACGTTCCATATACACATGCGAATGTTACAATGGCTTATAAAGATTTCGCGTATAAACCAACGACGGATCTCGCGACGGGGTTGAGAAAATTCGTGAAGTGGTACGTTCGTTATTATGGGATTCAGTCGAGGCTAAAAAAGGAAAATGAATTACCCGAGGATTCCGCTTGA 1344 0.4598 MASPPDTSKTIKLERYNSYIRKVNSTKLLNASSKLLFRATLLIALVLVFFFTFNYPPLSDSTNHHFHTHSHFLTSAFGGGGAWERHVRHSAIPRRPNGFTVLVTGAAGFVGSHCSLALKKRGDGVIGLDNFNSYYDPSLKRARQALLTQHQIFIVEGDLNDAPLLTKLFDVVPITHILHLAAQAGVRYAMQNPQSYIKSNIAGFVNLLEVSKAANPQPAIVWASSSSVYGLNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKTIDVYQTQEGKEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKKGPAQLRIYNLGNTSPVPVGKLVSILENLLSTKAKKHIIKMPRNGDVPYTHANVTMAYKDFAYKPTTDLATGLRKFVKWYVRYYGIQSRLKKENELPEDSA* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2742 447 Pfam NAD dependent epimerase/dehydratase family 101 339 IPR001509 -
Mtr3g2742 447 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Mtr3g2742 447 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Mtr3g2742 447 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Mtr3g2742 447 PRINTS Nucleotide sugar epimerase signature 392 409 - -
Mtr3g2742 447 Gene3D - 278 426 - -
Mtr3g2742 447 PANTHER EPIMERASE-RELATED 1 442 - -
Mtr3g2742 447 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 1 442 - -
Mtr3g2742 447 Gene3D - 102 413 - -
Mtr3g2742 447 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 94 432 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2742 Mtr-Chr3 41441851 41443602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2742 1 447 Miscellaneous Gene Families AT3G23820 80.568 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2742 K08679 - zju:107422361 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2742 3 41441851 41443602 Mtr3g2742 3 41441851 41443602 ECH