Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2726 ATGATGGTTTCCAACAACAGTGTAACTGCATTATTATTTCTACTGTTGGCTGGTTTTGTGAGCTCAGATTTAACAGAAGACAGAAAAGATTGTGCTGACAAACTTGTTACTCTTGCTAGTTGTCTTCCTTACGTTGGTGGTAGTGCCAATACCCCCACTATAGATTGTTGCACTAACCTTAAACAAGTCCTTAATAACACCAAAAAATGCATCTGTATCCTCATCAAAGATAGCAATGACCCCAAACTTGGCTTCCCAATGAATGCCACTCTTGCTGTACAGCTTCCAAACGCTTGTCACATACCATCTAATATATCTGAATGTGTAGATCTTCTACATTTGTCACCTAAATCCCCTGAAGCTAAGGTGTTTGAAGGACTTGGAAATTCTACCAAAACAAACAGTTCCACCCCTATTTCCAGCGGTTCTGCTGAGAAGGGATCAAGCTCAAGTTCTGAGGAAAAGAGTGGTGGTGGATTGGGAAGGAGGTGGCTGGTGGCAGAGGTGGTTTGTGCTATTTTACCATTTCTTTTCATATCTCACTTCTTCATCCTAACTTGA 561 0.4118 MMVSNNSVTALLFLLLAGFVSSDLTEDRKDCADKLVTLASCLPYVGGSANTPTIDCCTNLKQVLNNTKKCICILIKDSNDPKLGFPMNATLAVQLPNACHIPSNISECVDLLHLSPKSPEAKVFEGLGNSTKTNSSTPISSGSAEKGSSSSSEEKSGGGLGRRWLVAEVVCAILPFLFISHFFILT* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2726 186 PANTHER PROTEASE INHIBITOR/SEED STORAGE/LTP FAMILY PROTEIN 9 184 - -
Mtr3g2726 186 CDD AAI_LTSS 38 101 - -
Mtr3g2726 186 Gene3D - 28 108 IPR036312 -
Mtr3g2726 186 MobiDBLite consensus disorder prediction 127 156 - -
Mtr3g2726 186 MobiDBLite consensus disorder prediction 125 158 - -
Mtr3g2726 186 Pfam Probable lipid transfer 26 108 IPR016140 -
Mtr3g2726 186 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 184 IPR043325 -
Mtr3g2726 186 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 108 IPR036312 -
Mtr3g2726 186 SMART aai_6 31 108 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2726 Mtr-Chr3 41244768 41246576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2726 8 183 Acyl Lipid Metabolism Gene Families AT1G55260 42.373 2.87e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2726 - - pvu:PHAVU_001G268300g 212.616