Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2592 ATGCCAAGCAAACTAAGGAAGGCAATTGGTGCAGTAAAAGACCAAACAAGCATTAGCCTAGCAAAGGTAACACATGCTGCAAATCTTGAGGTAACAATTCTTAAAGCAACAACACATGATAAAAATCCAATTGAAGAACGTTATGTGAATGAAATTGTCAACATAGTATCTTCCAACAAAGCCTATGCTGCTGCATGTGCACAATGCATAGGTAAAAGAATGGGCAAAACTAGAAATTGGGTTGTTGCACTTAAATCTCTTATGATTGTCCTTAGAATATTTCAAGATGGTGATCCATATTTTCCTAGAGAAGTTTTTCATTCAATGAAAAGGGGTGCAAAAATTCTCAACCTTTCAAGTTTCAAAGATGATTCCAATTCTAGTCCTTGGGATTACACTGCATTTATAAGAACATTCGCATTGTACCTTGATGAACGATTAGATTGTTTCCTAACGGGAAAACTTCAACGACGATTCACGTATAATAATCGGTTTCATGAGAAGAATCAAAGGAATGAACCTGGTATTAGAGACATGAAACCTACATTGGTTCTTAATAGAATCACTTATTGGCAAAGGTTGTTGGATAGAGCTATTGGTACGAGACCGACTGGAGCGGCTAAGAATAATCGTTTGGTTCAGATTTCTCTTTATGCTGTTGTGCAAGAAAGTTTTGATCTTTACAAAGATATCTCTGATGGGCTTGGGGTTGTTTTGGATAATTTCTTCAATTTACCACTTTCAGCTTGTGTTACTGCATTCAATGCATGTGTTAAATCATATAAACAATTTGATGAGTTATCTGCATTTTATTCATTTTGTTTAAATATTGGAATTGGAAGGTCCTATGAGTATCCAAGTGTGCAAAAAGTTTCCGAAGAGCTTATGGAGACATTACAAGCTTTCTTGAAGGATCAAGCTTCATTCCATAATACTGCTTCAAAACATTTTATTCTTTCTGCACAAAAAAAATCTAATGCAGGTTTAAGTTCATCTCAAGACGAATTAGGCACTGAAAGATGTGGAACACTTGATAGGTATTTTGAGACTGGTTCTGAGTTTGGATCTCAATGTACATCATTGGAAGATTTAATGAGTGCTACTGATGTTGCCGAGAGTTCCCGCGGTTCAATTGAACATGATAGGTATTCCGAGGAATCTGATGAGAAACATTCATTACAATATGATGATGGGTTTGGTAGCGCTAATGGTTCTGGTTCTGTTAGATCATCGACAATCGACAAAAATTCTAGGTCAAGTTTTGATATAGTAAGTGTTGATGATATGCATGTGCAACAAAATCATCAAACAAAGGAAAGTTCCAAAGATTGTTGGGAAATAGTGTTAGCAAAGACAATAACTAATGAAACACCGTCACCTAAATTGGAGAATGGATTTGACTCTTTTGACAAAGCATTTGATCAAGCTTTAGTACCTCATCAAAAATATAATCCATTCCTAGAAGACATTGGAACTTTAGCTCCTCATACCAATGCCAATGATAATTTTGATGATGCTTTTGGTGTATCACCAACTTTTAAGGCAACACCATCACCTACCTTTAATGCTCATGATCCTCTTGCATCATCTTTCTCTGATCAAAATTCTAATTCCTTAACAAATTTGGATCTAATTTTTGGTGACATAAATCCAAATGACACAACAGTGGCACCAACTTTTAAGGCTCAACAGTCTTTTAATCATGGTTCAGCACCAACGTTTCAGGCTCAACATTCTTTTAAGAATGGTTCAACACCAACTTTTCAAGTGCACAATTCAAATGATAATGCAATAATAGAATCACCAATTGAGAATCCTAATACTAGTAGTATTGTTCCCTTGGATTCACATAATAGTTTTTACAATTCAACAGTGGTTCCAACTTTTCAGGCTCAACATTCTTTTAAGAATGGTTCAATACCAACTTTTCAAGCTCAACATTCTTTTAGGAATGGTTCGACGCCAATTTTTCGGGCTCAACATTCTTTTAAGAGTGGTTCAACACCAACATTTCAAGTTCACAATTCAAATGATAATGACATAGCAGAATCACCAACAAATATCGTTGAGAATCCTAATACTTGTACTGTTCCCTTTGATTCGCACAATAGTTTTTACAATTCAACGGTTCCACCAACTTTTCAGGCTCAACATTCTTTTAGGAATGGCTCGACACCAACTTTTCAAGCTCAACCTTCTTTTAAGCATGACTCAACACCAACTTTTCAGGCTCAACATTATTTTAAGAATCGTTCAACGCCAAATTTTCAAGTGCACAATTCAAATGATAATGCAATAGAAGAATCACCAACCTATAATATTGTTCCTAATATTAGTATTGTTCCCTTTGACTCACATAATAGTTTTTACAATTCAACAGTTGCACCAACTTTCCAGGCTCAACATTCTTTTAGGAATGATTCAACACCATCTTTTCAGGCTCAACATTCGTTTAGGAATGGTTCAACATCAACTTTTCAAGTGCACAATTCAAATGATAATGCAATAGTAGAATCAACAACCTATACTATTGAGAGTCCTAATACTAGTATTGTTCCATTTGATTCACATAATAGTTTTTACAATTCAACAATTGCACCAACATTTAGTGCAAATGGTGGCAATGAAATAACATCGGCAACACAGATAGAAGATGATCTTTTTGGACCATGGCCTAGTGCAACAACCAATGATCCAACGTCTAACGTGTCATCAATGCAAGATCAAACTTTGTTGCAATTTCAACAACTGTGGTTGGAACAACAAAACAAGATTATAGCAAAGCATATGACTTGA 2796 0.3534 MPSKLRKAIGAVKDQTSISLAKVTHAANLEVTILKATTHDKNPIEERYVNEIVNIVSSNKAYAAACAQCIGKRMGKTRNWVVALKSLMIVLRIFQDGDPYFPREVFHSMKRGAKILNLSSFKDDSNSSPWDYTAFIRTFALYLDERLDCFLTGKLQRRFTYNNRFHEKNQRNEPGIRDMKPTLVLNRITYWQRLLDRAIGTRPTGAAKNNRLVQISLYAVVQESFDLYKDISDGLGVVLDNFFNLPLSACVTAFNACVKSYKQFDELSAFYSFCLNIGIGRSYEYPSVQKVSEELMETLQAFLKDQASFHNTASKHFILSAQKKSNAGLSSSQDELGTERCGTLDRYFETGSEFGSQCTSLEDLMSATDVAESSRGSIEHDRYSEESDEKHSLQYDDGFGSANGSGSVRSSTIDKNSRSSFDIVSVDDMHVQQNHQTKESSKDCWEIVLAKTITNETPSPKLENGFDSFDKAFDQALVPHQKYNPFLEDIGTLAPHTNANDNFDDAFGVSPTFKATPSPTFNAHDPLASSFSDQNSNSLTNLDLIFGDINPNDTTVAPTFKAQQSFNHGSAPTFQAQHSFKNGSTPTFQVHNSNDNAIIESPIENPNTSSIVPLDSHNSFYNSTVVPTFQAQHSFKNGSIPTFQAQHSFRNGSTPIFRAQHSFKSGSTPTFQVHNSNDNDIAESPTNIVENPNTCTVPFDSHNSFYNSTVPPTFQAQHSFRNGSTPTFQAQPSFKHDSTPTFQAQHYFKNRSTPNFQVHNSNDNAIEESPTYNIVPNISIVPFDSHNSFYNSTVAPTFQAQHSFRNDSTPSFQAQHSFRNGSTSTFQVHNSNDNAIVESTTYTIESPNTSIVPFDSHNSFYNSTIAPTFSANGGNEITSATQIEDDLFGPWPSATTNDPTSNVSSMQDQTLLQFQQLWLEQQNKIIAKHMT* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2592 931 PANTHER CLATHRIN COAT ASSEMBLY PROTEIN AP180 1 929 - -
Mtr3g2592 931 MobiDBLite consensus disorder prediction 398 414 - -
Mtr3g2592 931 MobiDBLite consensus disorder prediction 369 414 - -
Mtr3g2592 931 MobiDBLite consensus disorder prediction 374 395 - -
Mtr3g2592 931 Pfam ANTH domain 29 305 IPR011417 GO:0005543
Mtr3g2592 931 SUPERFAMILY GAT-like domain 173 301 - -
Mtr3g2592 931 ProSiteProfiles ENTH domain profile. 21 157 IPR013809 -
Mtr3g2592 931 Gene3D ANTH domain 168 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Mtr3g2592 931 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 929 IPR045192 GO:0048268|GO:0072583
Mtr3g2592 931 Gene3D - 2 155 IPR008942 -
Mtr3g2592 931 SMART enth_2 27 157 IPR013809 -
Mtr3g2592 931 SUPERFAMILY ENTH/VHS domain 28 150 IPR008942 -
Mtr3g2592 931 CDD ANTH_N_AP180_plant 29 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2592 Mtr-Chr3 39878135 39881243 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2592 - - mtr:MTR_3g080490 1875.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2592 3 39878135 39881243 Mtr3g2592 3 39878135 39881243 ECH