Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2589 ATGGAAGATTTTTCACAAAACTCAAAATGGAAGTATCATGTTTTCTTGAGTTTTAGGGGAGAAGACACGCGCTTAGGCTTCACCGATCACCTATATGCATCCTTGGTGCGCAAGAGTATAATAACGTTCAGAGATGATGAAGAACTTGCAAGAGGTGAAGTCATCTCACAAAAACTCCTCCATGCAATCGAAGAATCTCTCTCAGCAATTGTTATAATCTCTAAAAACTATGCTGACTCAGCTTGGTGTTTGGATGAGTTAGTCAAGATTCTCGAATCCAAACGGTTGTTGGGACAACAGGTGTTCCCAATCTTCTACGGTGTAGATCCCTCTGATGTAAGGAATCAAAGGGGAAGTTTTGCTGAGGCTTTTAAGAAACATGAAGAAAAATTTAGTGAAAGCAAAGAGAAGGTGCAAAGGTGGAGAGATGCATTGAGAGAGGTTGCCAATTTCTCAGGGTGGGACTCTAAGGATCAACATGAAACTAAACTCATTGAAGAAGTTATTGCACAAGTATGGAAAAGACTAGAACTCAAGTTCCCATCCTATAATGATGGTCTGGTTGCAATTGATGTAAGATTGGAAGAACTATATTCAACTCTGAAGCTAGGACTGGAGGATGTTCATTTCATAGGGATATGGGGTATGGGCGGGATAGGAAAAACAACTCTTACTACAGCTCTCTTCAAAAAAATTAAAAGCCAATTTGATGTAAGTTGCTTCATTACCAATGTCAGAGAGGGAACTGAACTTGTGCAAGGTATAGTTTTGAAATCATCGCCATCTACGCTGTATGAAGCACATTGGGACCCTGAGGCGTTCTCAAAGATGGGTAATCTTAGGTTACTCATTATATTATGTGATTTGCATCTTTCCCTTGGTCTGAAATGTCTTTCTAGCTCACTAAAAGTGCCTGTATGGTGGGGATATCCACTGAATTCTCTACCAGTTGGGGTTCAACTAGATGAGCTTGTAAATTTACAAATGATCAACAGTAAAGTTAAACAGTTGTGGAATGGAAATAAGTATTATGGAAAGCTGAAAGTAATTGATTTGAGTAACTCTAAAGATTTACGTCAAACTCCAAATGTCTCTGGAATTCCAAATCTTGAAGAGCTGTATCTTAATGATTGTACAAAACTTGTTGAAGTTCACCAATCCATCAGACAACATAAAAAACTTAGAGTGTGTTTGGATGGGGGAATGTTTTGA 1212 0.3861 MEDFSQNSKWKYHVFLSFRGEDTRLGFTDHLYASLVRKSIITFRDDEELARGEVISQKLLHAIEESLSAIVIISKNYADSAWCLDELVKILESKRLLGQQVFPIFYGVDPSDVRNQRGSFAEAFKKHEEKFSESKEKVQRWRDALREVANFSGWDSKDQHETKLIEEVIAQVWKRLELKFPSYNDGLVAIDVRLEELYSTLKLGLEDVHFIGIWGMGGIGKTTLTTALFKKIKSQFDVSCFITNVREGTELVQGIVLKSSPSTLYEAHWDPEAFSKMGNLRLLIILCDLHLSLGLKCLSSSLKVPVWWGYPLNSLPVGVQLDELVNLQMINSKVKQLWNGNKYYGKLKVIDLSNSKDLRQTPNVSGIPNLEELYLNDCTKLVEVHQSIRQHKKLRVCLDGGMF* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2589 403 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Mtr3g2589 403 SMART till_3 11 151 IPR000157 GO:0007165
Mtr3g2589 403 Gene3D Ribonuclease Inhibitor 298 397 IPR032675 -
Mtr3g2589 403 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 272 396 IPR044974 GO:0006952
Mtr3g2589 403 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 262 IPR044974 GO:0006952
Mtr3g2589 403 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Mtr3g2589 403 Pfam NB-ARC domain 206 242 IPR002182 GO:0043531
Mtr3g2589 403 Gene3D - 5 176 IPR035897 -
Mtr3g2589 403 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 262 - -
Mtr3g2589 403 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 272 396 - -
Mtr3g2589 403 Gene3D - 177 297 IPR027417 -
Mtr3g2589 403 PRINTS Disease resistance protein signature 210 225 - -
Mtr3g2589 403 PRINTS Disease resistance protein signature 276 290 - -
Mtr3g2589 403 Pfam TIR domain 11 183 IPR000157 GO:0007165
Mtr3g2589 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 383 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2589 Mtr-Chr3 39862276 39865405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2589 11 176 Miscellaneous Gene Families AT5G44900 35.928 1.98e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2589 - - mtr:MTR_3g080470 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2589 3 39862276 39865405 Mtr3g2589 3 39862276 39865405 ECH