Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2586 ATGCATTGTATACTCATTCTTTCCATCCTCATTTCCTCCTACTTCTCACTTCCACTACTTGCAGATGGCAGTTCCATTGGAGTGAACTATGGTCGCATAGCAAACAACCTACCCTCAGCATTCAAAGTAGTCAAGCTTCTAAAATCACAAGGAATCGACCGGGTCAAACTCTACGACACCGACCCGGCTGTTCTCAAATCCTTATCCGGATCCGGAATCAAAGTAACCGTAAACCTCCCAAACGAACAACTCTTTCACACAGCCAGAAAACTCTCCTACGCCCTCACATGGCTCCAAAAAAACGTCGTCGTTTACCACCCCAAAACCCAAATCGAAGCCATCGCCGTCGGCAACGAAGTCTTCGTCGACACACACAACACCACCAAATACCTCATCCCCGCCATGAAAAACATTCACAAAGCTTTAGTCAAATTCAACCTCCACAATTCCATTAAAATCTCTTCACCAATTGCTTTATCCGCTCTCGGATCCTCTTACCCATCTTCAACCGGGTCATTCAAACCCGAACTCATAGAACCCGTTATTAAACCAATGTTAAACTTCCTCCGTGAAACGTCTTCGTATTTGATGGTCAACGTTTACCCCTTCTTCGCTTACGAGTCAAACGCTGACGTCATTTCTTTAAACTACGCTCTATTTCGTGAAAACCCGGGTAATGTGGATCCAGGTAACGGGTTAAAATACTACAACATCTTCGACGCACAAATCGACGCTGTTTTTGCAGCGCTTAACGTGCTTCAATACGACGACGTTAGAGTGGTTGTCAGTGAAACGGGTTGGCCTTCGAAAGGTGATAGTAATGAGGTGGGTGCATCCCCACAGAACGCTGCTGCGTACAACGGTAATCTTGTTAAGAAGATTCTTAACAACGGTGGGACCCCTTTAAGACCGAATGCGAATCTGACCGTTTATTTGTTTGCACTTTTTAATGAGAATGGGAAAGTGGGACTTACTTCGGAGAGGAATTTTGGGATGTTTTATCCTGATATGAAGAAAGTTTATGATGTTCCGTTTACCGTGGCGGGGTTGAAGAGTTACCGTGACGTTCCGGCGCCGGGAAGTGGCTGA 1089 0.4555 MHCILILSILISSYFSLPLLADGSSIGVNYGRIANNLPSAFKVVKLLKSQGIDRVKLYDTDPAVLKSLSGSGIKVTVNLPNEQLFHTARKLSYALTWLQKNVVVYHPKTQIEAIAVGNEVFVDTHNTTKYLIPAMKNIHKALVKFNLHNSIKISSPIALSALGSSYPSSTGSFKPELIEPVIKPMLNFLRETSSYLMVNVYPFFAYESNADVISLNYALFRENPGNVDPGNGLKYYNIFDAQIDAVFAALNVLQYDDVRVVVSETGWPSKGDSNEVGASPQNAAAYNGNLVKKILNNGGTPLRPNANLTVYLFALFNENGKVGLTSERNFGMFYPDMKKVYDVPFTVAGLKSYRDVPAPGSG* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2586 362 Pfam Glycosyl hydrolases family 17 26 345 IPR000490 GO:0004553|GO:0005975
Mtr3g2586 362 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 353 IPR044965 GO:0004553|GO:0005975
Mtr3g2586 362 Gene3D Glycosidases 24 351 - -
Mtr3g2586 362 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Mtr3g2586 362 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Mtr3g2586 362 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN-RELATED 8 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2586 Mtr-Chr3 39827191 39828781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2586 22 355 Glycoside Hydrolase AT2G05790 73.353 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2586 - - mtr:MTR_3g080410 710.294