Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2538 ATGAAGAAGGTTTCTCTTTATGCTTGTTTATTACTCAATTTGATCAGTCTTTTGGTTATTTTTCCATATAGCAAAGCTAGTCAAGCTGATAAACTCAATGAGTTTATTCTGTCTAGAAAATCTCAGAATCCTCCTAAGACACTTTCTTGGGAAGAGGGAGATGCATTGAAAACACATTCTTTTTCTGCTGCTTATGTTGCACCACCTCAAGAGGAGCTAAGACTAGCAGACAAGATCGTCACATTGCCTGGTCAACCCTATGGAGTAAATTTTGACCAATATTCAGGCTATGTCACAGTTGATCCTGAGGCTGGAAGAGAACTTTTCTATTATTTTGTGGAGTCTCCATATAACTCTTCCACTAAACCTTTAGTACTGTGGTTCAATGGAGGACCTGGTTGTTCCTCACTGGGATATGGAGCCTTTCAAGAGCTCGGACCCTTCAGAGTCAATTCTGATGGAAAAACATTATACCGCAACCCATATGCTTGGAATGAAGTTGCAAATGTACTCTTCTTGGAATCTCCGGCAGGAGTAGGATTTTCCTACTCAAACACAACATCTGACTATGACAATTCAGGAGATAAGTCCACCGCTAAAGATGCCTATGTTTTCCTCATCAACTGGCTGGAGAGATTTCCACAGTACAAAACAAGAGCTTTTTACATAACTGGAGAGAGTTATGCTGGTCACTATGTTCCGCAGCTTGCATCGACTATTCTTCACAACAATAAACTCTATAACAACACCACTATTAACCTCAAAGGCATTTCTATAGGGAATGCTTGGATTGATGATGCCACAGGTTTAAGGGGGTTATTTGATTACCTTTGGACTCATGCGTTGAACTCGGATCAAACTCATGAGTTGATTGAGAAGTATTGTGACTTCACTTCTGAAAACGTTTCATCAATTTGTATCAATGCAACACATAAGGCCTTCCTTGAGCAAGGAAAGATAGACTCCTATAACATCTATGCTCCACTATGTCATGACTCTTCTCTCAAAAATGGCTCAACTGGTTATGTAACTAATGACTTTGACCCTTGTTCTGATTACTATGGTGCTGCCTATCTAAATACACCAGAGGTTCAAAAGGCTCTTCATGCAAAACCTACAAATTGGACCCATTGCACTCGTCTTCTTACTGACTGGAAAGACAGTCCAATTACCATCTTACCAACCGTCAAGTATCTCATCAATAGCGGGATTAAATTATGGATATACAGGCAAGTTCACTTTCATTATAATATAAATTCTTAA 1263 0.3935 MKKVSLYACLLLNLISLLVIFPYSKASQADKLNEFILSRKSQNPPKTLSWEEGDALKTHSFSAAYVAPPQEELRLADKIVTLPGQPYGVNFDQYSGYVTVDPEAGRELFYYFVESPYNSSTKPLVLWFNGGPGCSSLGYGAFQELGPFRVNSDGKTLYRNPYAWNEVANVLFLESPAGVGFSYSNTTSDYDNSGDKSTAKDAYVFLINWLERFPQYKTRAFYITGESYAGHYVPQLASTILHNNKLYNNTTINLKGISIGNAWIDDATGLRGLFDYLWTHALNSDQTHELIEKYCDFTSENVSSICINATHKAFLEQGKIDSYNIYAPLCHDSSLKNGSTGYVTNDFDPCSDYYGAAYLNTPEVQKALHAKPTNWTHCTRLLTDWKDSPITILPTVKYLINSGIKLWIYRQVHFHYNINS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2538 420 Pfam Serine carboxypeptidase 83 410 IPR001563 GO:0004185|GO:0006508
Mtr3g2538 420 SUPERFAMILY alpha/beta-Hydrolases 77 409 IPR029058 -
Mtr3g2538 420 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 410 IPR001563 GO:0004185|GO:0006508
Mtr3g2538 420 Gene3D alpha/beta hydrolase 74 332 IPR029058 -
Mtr3g2538 420 ProSitePatterns Serine carboxypeptidases, serine active site. 223 230 IPR018202 GO:0004185
Mtr3g2538 420 Gene3D - 350 382 - -
Mtr3g2538 420 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Mtr3g2538 420 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Mtr3g2538 420 PRINTS Carboxypeptidase C serine protease (S10) family signature 209 234 IPR001563 GO:0004185|GO:0006508
Mtr3g2538 420 PANTHER CARBOXYPEPTIDASE 20 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2538 Mtr-Chr3 39373808 39381058 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2538 K16297 - gmx:100790394 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2538 3 39373808 39381058 Mtr3g2538 3 39373808 39381058 ECH