Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2533 ATGGACCAAAAGCCACATGTTGTATTAGCACCATTTCCAGCACAAGGTCATGTGAACCCTTTCATGCAATTAGCCAAACTCCTACGTTGCAACGGTTTTCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGATAAAATCTCTTGGACAAGACTTTGTGAAGGGTCTACCAGATTTTCAATTTGAGACCATACCTGATGGTTTGCCAGAGTCAGATAAAGATGCAACACAAAATATTCCAACGTTGTGTGATGCAACTAGAAAAAATTGTTATGCTCCTTTCAAAGAGCTTATCAATAAGCTTAACACCTCATCACCTCATATTCCAGTTACTTGCATAATTGCTGATGGTAATTATGACTTTGCTGGAAGAGTGGCTAAAGATTTGGGCATTCGAGAGATACAACTTTGGACAGCTTCTACTTGTGGGTTTGTGGCATATTTGCAATTCGAGGAGCTTGTCAAAAGAGGAATTCTTCCATTCAAAGATGAAAATTTTATTGCCGATGGCACCTTGGAAACAAGTTTAGATTGGATCTCGGGAATGAAAGATATTAGCCTAAAAGACCTTCCAAGCTTCATAAGAATCACAGATCTAAATGATGTAATGTTTAATTTCCAAGGTTCTAAAGCACACAATTGTTTAAGATCATCAATGATTATAATCAACACATTTGAAGAATTGGAAGGTGAAGCACTTGACACCCTTAGGGCCAAAAACCCTAACATATATGACATTGGTCCACTTCACATGCTTGGTAGGCACTTTCCTGAGAAGGAACATGGGTTTACGGCAATTGGTTCGAGTCTATGGAAATCTGACCCAGAATGCATAACATGGTTGAATAAATGGAAACCTTGCTCAGTCCTATATGTTAATTATGGAAGTATAGCTGTTATGGCAAATCATCAATTGAAAGAATTTGCTTGGGGAATAGCAAATAGCAAATTACCATTTTTGTGGATTATGAGACCAGATGTAGTAATGGGTGAAGAGACTTCATCTTTGCCTCAAGAGTTTCTAGATGAAGTTAAGGATAGAGGATACATAACTAGTTGGTGCTATCAAGATCAAGTGCTTTCTCATCCATCAGTTGGGGGATTCTTGACTCATTGTGGTTGGAATTCTACACTTGAAACTATTTCCTATGGTGTGCCTACTATTTGTTGGCCTTTCTTTGGTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAAAATTGGGATGGAAATTAACCATGATGTGAAAAGGGAAGAGATAACCGAACTTGTGATGGAAATGATGGAAGGAGAAAAAGGAAAAGAAATGAGACAAAAGAGTTTGGTGTGGAAGAAGAAAGCTACAGATGCTACTAATTTGGGAGGATCATCATACAATAATTTCCATAAGTTAATCAAAGAGGTTCTTCATCACAAGGCCATTTGA 1440 0.3771 MDQKPHVVLAPFPAQGHVNPFMQLAKLLRCNGFHITFVNTEFNHKRLIKSLGQDFVKGLPDFQFETIPDGLPESDKDATQNIPTLCDATRKNCYAPFKELINKLNTSSPHIPVTCIIADGNYDFAGRVAKDLGIREIQLWTASTCGFVAYLQFEELVKRGILPFKDENFIADGTLETSLDWISGMKDISLKDLPSFIRITDLNDVMFNFQGSKAHNCLRSSMIIINTFEELEGEALDTLRAKNPNIYDIGPLHMLGRHFPEKEHGFTAIGSSLWKSDPECITWLNKWKPCSVLYVNYGSIAVMANHQLKEFAWGIANSKLPFLWIMRPDVVMGEETSSLPQEFLDEVKDRGYITSWCYQDQVLSHPSVGGFLTHCGWNSTLETISYGVPTICWPFFGEQQTNCRYLCNTWKIGMEINHDVKREEITELVMEMMEGEKGKEMRQKSLVWKKKATDATNLGGSSYNNFHKLIKEVLHHKAI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2533 479 PANTHER GLYCOSYLTRANSFERASE 3 473 - -
Mtr3g2533 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 471 - -
Mtr3g2533 479 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 292 440 IPR002213 GO:0008194
Mtr3g2533 479 Gene3D Glycogen Phosphorylase B; 6 460 - -
Mtr3g2533 479 CDD GT1_Gtf-like 5 445 IPR002213 GO:0008194
Mtr3g2533 479 ProSitePatterns UDP-glycosyltransferases signature. 356 399 IPR035595 -
Mtr3g2533 479 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 3 473 - -
Mtr3g2533 479 Gene3D Glycogen Phosphorylase B; 275 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2533 Mtr-Chr3 39302311 39306544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2533 2 477 Glycosyltransferase AT1G22380 51.992 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2533 - - mtr:MTR_3g079480 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2533 3 39302311 39306544 Mtr3g2533 3 39302311 39306544 ECH