Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2530 ATGGATTCTTATTCTCCCTCTACGCATATACAACAAAAGCCTCATGCTGTATTTGTACCATTTCCAGTACAAGGTCATGTGAACCCTTTCATGCAACTTGCCAAACTCTTTCGTTGCAAAGGTTTTCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGATAAAATCGCTTGGACAAGACTTTGTGAAGGGTCTACCAGATTTTCAATTTGAGACTATACCCGATGGTTTACCAGAATCTGATAAAAATGCAACACAAGATGTTGTACCGTTGTGTGAAGCAAGTAGAAAAAACTTTCACGCTCCTTTGAAAGAGCTTGTGAAAAAGCTCAACACTTCTTCACCACATATTCCAGTTACTTGCATAATTGCTGATGGATTTTCGGGCTTTGCTGGAAAAGTGGCAAAGGATTTGGGGATTCAAGAACTAGTGTTTTGGACTGCTTCTGCTTGTGGCATGTTGGGATATTTACAGTACGATGAGCTTGTTGAGAGGGGAATTATTCCCTTCAAAGGTGAAACTTTTATTGATGATGGCACCTTGGATACAAGTCTAGATTGGATCTCAGGAATGAAAGATATCAGACTAAAAGATCTTCCAAGCTTCATGAGAATCACCGATCTAAGTGATATTTTGTTTGATTTTGTGGGCTCCGAGACACAAAATTGTTTGAGATCATCGACAATAATCATTAACTCGTTCGAAGAATTGGAAGGTGAAACCCTTGACACCCTTAGGGCCAACAATCCAAACATATATAGCATTGGCCCGATTCACATGCTTGGTAGACATTTTCCTGAGAAAGAAAAAGGTTTTAAAGCAAGTGGTTCGAGTTTATGGAAATCTGACCCGGAATGTATAAAATGGTTGAGTAAATGGGAACCTTGCTCAGTACTATATATTAATTATGGAAGTATAACTGTTATGACAAATCATCACTTGAAAGAATTTGCTTGGGGAATAGCAAATAGTAAATTACCTTTTTTATGGATATTGAGACCAGATGTAGCAATGGGTGAAGAGACTTCAACTTTGCCACAAGATTTTCTAGATGAGGTTAAGGATAGAGGATACATAACTAGTTGGTGCTATCAAGATCAAGTGCTTTCTCATCCATCAATTGGGGGATTCTTAACTCATTGTGGTTGGAATTCTACACTTGAAACTATTTCCTATGGTGTGCCTACTATTTGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTTGGTATTTATGCAAGTCTTGGAAAATAGGGATGGAAATTAACCATGATGTTAAAAGGGATGATATAACAGAACTTGTTGTGCAAATGATGGAAGGAGAAAAGGGAAAAGAAATGAGACACAAGTGCTTGGAGTGGAAGAAGAAAGCTAGAAAAGCTACTAATTTGGGTGGATCATCATACAATAATTTCCAGAAGTTAATCAAAGAGGTTCTTCATCATAAAGCTATTTGA 1467 0.3756 MDSYSPSTHIQQKPHAVFVPFPVQGHVNPFMQLAKLFRCKGFHITFVNTEFNHKRLIKSLGQDFVKGLPDFQFETIPDGLPESDKNATQDVVPLCEASRKNFHAPLKELVKKLNTSSPHIPVTCIIADGFSGFAGKVAKDLGIQELVFWTASACGMLGYLQYDELVERGIIPFKGETFIDDGTLDTSLDWISGMKDIRLKDLPSFMRITDLSDILFDFVGSETQNCLRSSTIIINSFEELEGETLDTLRANNPNIYSIGPIHMLGRHFPEKEKGFKASGSSLWKSDPECIKWLSKWEPCSVLYINYGSITVMTNHHLKEFAWGIANSKLPFLWILRPDVAMGEETSTLPQDFLDEVKDRGYITSWCYQDQVLSHPSIGGFLTHCGWNSTLETISYGVPTICWPFFAEQQTNCWYLCKSWKIGMEINHDVKRDDITELVVQMMEGEKGKEMRHKCLEWKKKARKATNLGGSSYNNFQKLIKEVLHHKAI* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2530 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 480 - -
Mtr3g2530 488 Gene3D Glycogen Phosphorylase B; 284 463 - -
Mtr3g2530 488 PANTHER GLYCOSYLTRANSFERASE 10 482 - -
Mtr3g2530 488 CDD GT1_Gtf-like 14 464 IPR002213 GO:0008194
Mtr3g2530 488 ProSitePatterns UDP-glycosyltransferases signature. 365 408 IPR035595 -
Mtr3g2530 488 Gene3D Glycogen Phosphorylase B; 15 469 - -
Mtr3g2530 488 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 301 449 IPR002213 GO:0008194
Mtr3g2530 488 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 10 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2530 Mtr-Chr3 39272719 39275133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2530 11 486 Glycosyltransferase AT1G22380 49.057 1.02e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2530 - - mtr:MTR_3g079480 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2530 3 39272719 39275133 Mtr3g2530 3 39272719 39275133 ECH