Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2527 ATGGACCAAAAGCTACATGCTGTATTAGTGCCATACCCAGCACAGGGTCATGTTAATCCCTTAATGCAACTAGCTAAACTCCTGCGTTGCAACGGTTTCCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGGTAAACTCACTTGGACAAGATTATATGAATGGTCTACCAGATTTTCAATTTGAGACCATACCTGATGGTTTGCCTCCTTTTAATAAAGATGCAACACAAGATATTCCAACGTTGTGTGATGCAACTAGAAAAAATTGTTATGCTCCTTTCAAAGAGCTTCTCAATAAGCTTAATACTTCATCACCACATATTCCAGTTACTTGCATTATTGCTGATGGTCTTTTTGGTTTTGCTGGAAGAGTAGCAAGAGATTTGGGCATTCAAGAAATACAGTTTTGGACTGCTTCTGCTTGTGGGTTTGTGGGATATTTGCATTATGATGAACTTGTCAAAAGAGGCATTCTTCCATTCCAAGATGAACATTTTGTTTGCGATGGCACCTTGGAAACAAGTATAGATTGGATCTCAGGAATGAAAGATATCAAATTAAAAGACCTTCCAAGCTTCATGAGAGTCACTGATCTAAATGATATTATGTTTGATTTCATGGGTTCTGAGTCACAAAACTGTTTGAGATCATCAACAATTATAATCAACACATTTGAAGAATTAGAAGATGAAGTCATTGCTACACTTAAGACCAAAAACCCTAACATATATAGCATTGGTCCACTTCACATGCTTGGTAGCAACTTTCCTAAAAAGGAACATGGTTTTAAGGCAAATGGTTCAAGTTTATGGAAAAGTGACCTAGAATGCACAAAATGGTTGAATAAATGGAAACCTTGCTCAGTTTTGTACGTTAATTATGGAAGTGTAACTGTTATGACAGATCATCACTTGAAAGAATTTGCTTGGGGAATAGCAAATAGTAAATTACCATTTTTATGGATAATGAGACCAGATGTAGTAATGGGTGAAGAAATTTCAACTTTGCCACAAGATTTTCTAGATGAAGTTAAGGATAGAGGATACATAACTAGTTGGTGCATGCAAGACCAAGTGCTTGCTCATCCATCAGTTGGGGTTTTTCTAACTCATTGTGGTTGGAATTCTACAATTGAAACCATTTCTTCAGGTGTTCCTACTATTTGTTGGCCCTTCTTTGCTGAGCAACAAACAAATTGCAAGTATTTATGCGACACTTGGAAAGTAGGAATGGAAATTAACAATGATGTAAAAAGGGAAGAGATAACAGAACTTGTACTGGAAATGATGAAAGGAGAAAAGGGAAAACAAATGAAACAAAAGAGCATAGAGTGGAAGAAGAAAGCTAAAAAGGCTAATGATTTTGGAGGATCATCATACACTAATTTCCATAAGTTAATTACAGAGGTTCTTCGTCACAATGCTTTTTGA 1440 0.3618 MDQKLHAVLVPYPAQGHVNPLMQLAKLLRCNGFHITFVNTEFNHKRLVNSLGQDYMNGLPDFQFETIPDGLPPFNKDATQDIPTLCDATRKNCYAPFKELLNKLNTSSPHIPVTCIIADGLFGFAGRVARDLGIQEIQFWTASACGFVGYLHYDELVKRGILPFQDEHFVCDGTLETSIDWISGMKDIKLKDLPSFMRVTDLNDIMFDFMGSESQNCLRSSTIIINTFEELEDEVIATLKTKNPNIYSIGPLHMLGSNFPKKEHGFKANGSSLWKSDLECTKWLNKWKPCSVLYVNYGSVTVMTDHHLKEFAWGIANSKLPFLWIMRPDVVMGEEISTLPQDFLDEVKDRGYITSWCMQDQVLAHPSVGVFLTHCGWNSTIETISSGVPTICWPFFAEQQTNCKYLCDTWKVGMEINNDVKREEITELVLEMMKGEKGKQMKQKSIEWKKKAKKANDFGGSSYTNFHKLITEVLRHNAF* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2527 479 CDD GT1_Gtf-like 5 456 IPR002213 GO:0008194
Mtr3g2527 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 471 - -
Mtr3g2527 479 ProSitePatterns UDP-glycosyltransferases signature. 356 399 IPR035595 -
Mtr3g2527 479 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 5 473 - -
Mtr3g2527 479 Gene3D Glycogen Phosphorylase B; 262 454 - -
Mtr3g2527 479 Gene3D Glycogen Phosphorylase B; 6 460 - -
Mtr3g2527 479 PANTHER GLYCOSYLTRANSFERASE 5 473 - -
Mtr3g2527 479 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 292 441 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2527 Mtr-Chr3 39252487 39258765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2527 2 474 Glycosyltransferase AT1G22380 52.321 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2527 - - mtr:MTR_3g079480 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2527 3 39252487 39258765 Mtr3g2527 3 39252487 39258765 ECH