Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2520 ATGAAACAAACACAAACCAAAGATAGAAACATGGGAGGAGGATTAGTTGGAGACAACATAGGATTAAACGAAGAGGTTATAAAAAAAACATGTAGTTTGTCTTTCAAAGCTCACAACTCAGAAAATGAACCTTATATTTCCGAACTGTTTAGGATATCCTCGGACTTAACAGAATATCTTGTTCTAAGCTTTCCAGGATCATGGGTTGAAACTGATTGGTTTGTAAGAAAATCGTTTGGTGAAACTAAGATTGATCTTGCTAAGTTTCCTTTGCTTAAAAGTGTTGGTAATGATGAAACTGCTTTGGTCAACCAAGCCTTCTTCAACAGATTCGAACGTTTGTTGAAACTTTCCTCATTTGTAGCTGAGGTGAAGAAAGCTATAGCAGAAGGGAAGCAAGTAGTGTTTACAGGGCACTCTTCAGGGGCTGTTTTGGCCATTCTAGCAACATTTTGGGCATTGGAAGAGTATCTTTACCCAACCAAAATCCAAATTCAGCACAAGTCACCTATGTGTGTCACTTTTGGTTCTCCCTTGGTTGGTAATCATATATTCTCTCATGCTTCAAACAGAGAAAAATGGTCTCATCATTTCATACACTTTGTCATGCAATATGACATTGTGCCAAGGATTTTCCTTGCTCCTTTCTCTTCCATTGAAAAACTTATTAGTCCTGTTCTTCAGCTTTTGACTCCTAACAACAACTCCTTAACTCAAGATCCAATAAGAGACAGTGTGACTTGTGAATTTTACTCTACTGTGATGAGGAATGCAGCAACTGTTACAAGTCATGTTGCTTGTAATCTAATGGGAAGCACGAATTTGTTGTTGGAGACTATGACAAATTTCGTCGAGTTAAGTCCGTATAGACCCTTTGGAACGTACATCTTTTGCAATGGTAATGGTCAAATGATTGTGGTAAAAAACTCAGACGCTGTTTTACAACTTATGTTTCATATTGCTCAGCTAAGAGATTTGGCACAACTTTCTGAAGTTGCCAACAAAAGCATACTGCAACATCTAGCCTATGAAGCTGAATTAGAAGAGAGCTTGGGAATGCAAAATGTGGTGTATTTAAACAAACTTGACGATCTTCCTTTGTCTTCTGGTGAGGGTCATGATACTGACATTGCAGCTGCCTTGGATAGCCTTGGACTGAGCGCAAGAGCACGACTATGCCTTCGAGCAGCTGGCGAGTTAGAAAAGCAAAAGGAAAGAAATGAAGAGAAAATAAAAAAGGAATTTCAGGATAAGGCTGTGCCAAGCATGAGGGATTTGGAAGAGTACAAATCAACATGTGAGATAAACAACGGAAAAGGTTATTATGATGCCTTCAAGGTGCAAAAGGAGCCAAAGGATTTCCAAGCAAACGTGAAGAGACTTGTGCTTGCAGGAGTATGGGATGAGATCATTGAAATGCTGAAGAGGTATGAACTGCCAGATGAGTTTGAAGGGAAAAAAGAATGGATTGAACACGGAACGAGATTCCGTCGTCTTGTTGAGCCTCTTGATATTGCCAATTATCATCGTCATTTGAAGAATGAGGACACAGGACCTTACATGAACAAGGCTAGACCAAAGAGGTATAGGTACACTCAGAGATGGTTGGAGCATGCAAACAGGTCACCAAAAGCAGAAATCACAGAATCTACCTTTTGGGCTGAGGTGGAAGAACTTTGCAGCTGGACTAGTAATAATAAACCTTTTGAAGATATCAAGGAAAGGGTTCTCAAACTTGAGCAAGATATTAAAATGTGGACTGATAAAGAGGTACTAACCAAGGATGTGTTGTCAAAGGATCCTACCTTCATAAAGTTATGGGAAACTCTACCTCAGGAACATAAAGCAACATCCTGCATCTCCACTCTCTTTACTGTTAAAGAATAA 1887 0.3937 MKQTQTKDRNMGGGLVGDNIGLNEEVIKKTCSLSFKAHNSENEPYISELFRISSDLTEYLVLSFPGSWVETDWFVRKSFGETKIDLAKFPLLKSVGNDETALVNQAFFNRFERLLKLSSFVAEVKKAIAEGKQVVFTGHSSGAVLAILATFWALEEYLYPTKIQIQHKSPMCVTFGSPLVGNHIFSHASNREKWSHHFIHFVMQYDIVPRIFLAPFSSIEKLISPVLQLLTPNNNSLTQDPIRDSVTCEFYSTVMRNAATVTSHVACNLMGSTNLLLETMTNFVELSPYRPFGTYIFCNGNGQMIVVKNSDAVLQLMFHIAQLRDLAQLSEVANKSILQHLAYEAELEESLGMQNVVYLNKLDDLPLSSGEGHDTDIAAALDSLGLSARARLCLRAAGELEKQKERNEEKIKKEFQDKAVPSMRDLEEYKSTCEINNGKGYYDAFKVQKEPKDFQANVKRLVLAGVWDEIIEMLKRYELPDEFEGKKEWIEHGTRFRRLVEPLDIANYHRHLKNEDTGPYMNKARPKRYRYTQRWLEHANRSPKAEITESTFWAEVEELCSWTSNNKPFEDIKERVLKLEQDIKMWTDKEVLTKDVLSKDPTFIKLWETLPQEHKATSCISTLFTVKE* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2520 628 Pfam Enhanced disease susceptibility 1 protein EP domain 425 622 IPR041266 -
Mtr3g2520 628 Coils Coil 397 417 - -
Mtr3g2520 628 Gene3D alpha/beta hydrolase 22 249 IPR029058 -
Mtr3g2520 628 SUPERFAMILY alpha/beta-Hydrolases 56 248 IPR029058 -
Mtr3g2520 628 Pfam Lipase (class 3) 62 213 IPR002921 GO:0006629
Mtr3g2520 628 Coils Coil 569 589 - -
Mtr3g2520 628 PANTHER PROTEIN EDS1-RELATED 11 625 IPR044214 GO:0006952
Mtr3g2520 628 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 11 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2520 Mtr-Chr3 39178335 39181893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2520 89 218 Acyl Lipid Metabolism Gene Families AT5G14930 29.231 7.09e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2520 K18875 - gmx:100778851 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2520 3 39178335 39181893 Mtr3g2520 3 39178335 39181893 ECH