Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2492 ATGGGGATTGCAGAAGAGAGAGTTGTGGCGGTTATCATGGTTGGAGGACCCACCAAAGGCACTCGATTCCGTCCATTATCATTCAACATTCCTAAACCACTCTTTCCATTAGCTGGACAACCAATGGTTCATCATCCAATCTCTGCTTGTCAAAAAATTCCTAATTTGGCTCGGATTTATCTCATTGGCTTCTACGAAGAACGCGAATTTGCATTATACGTCTCTTCCATCTCCAACGACCTTAAACTTCCTGTTAGATACTTGAAGGAGGACAAGCCTCATGGTTCTGCCGGTGGTCTTTATAACTTCAAAGATGTCATCATGGAGGAGGATCCGTCACATATTTTCTTGCTCAATTGTGATGTTTGCTGCAGTTTTCCTCTGCCACAAATGCTGGATGCTCACAAAAAACATGGCGGCATGGGAACAATACTTGTTGTCAAGGTTTCTCCGGAGTCAGCCAGCGAATTTGGGGAATTGGTGGCTGATCCTGTCACCAATGAACTCTTGCACTACACAGAGAAACCTGAAACTTTTGTTAGTGACCTTATAAACAGTGGTGTGTATATATTTACACCAGATATCTTTACTGCCATTGAGGGTGTTTCTTCTCAGCGGAAAGACAGAGCAAACTTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCAGGACACAAGGAGTCTACCGGCGAATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTCGCAGGGAAGAAACAGTTGTATATATATGAAACCATGGATTTTTGGGAACAAATCAAAACTCCTGGAATGTCCATAAAATGTTCGGCCTTGTATCTTTCGCAATTTCGCCACACATCCCCTCACCTATTAGCAAATGGAGATGGTATTAAGAAAGCCTGCATCATTGGTGATGTTTATATTCACCCATCAGCAAAGGTGCATCCGTCTGCAAAGATTGGTCCTGGTGTATCAATATCTGCAAATGCTCGTATAGGAGCTGGTGCAAGGCTCATAAATTGTATAGTCCTTGATGATGTTGAAATCAAGGAGAATGCTGTTGTTCTTCATGCAATTGTTGGATGGAAATCCTCCATTGGTCGATGGGCACGTGTCCAGGGTCGTGGAGATTACAACGCAAAGTTTGGGGTCACTATACTTGGTGAATCTGTTGCCGTTGAGGATGAGGTAGTGGTTATTAGTAGCATTGTCCTTCCACACAAGACCTTAAATGTCGGCGTTCAGGATGAGATTCTTTTATAG 1248 0.4327 MGIAEERVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACQKIPNLARIYLIGFYEEREFALYVSSISNDLKLPVRYLKEDKPHGSAGGLYNFKDVIMEEDPSHIFLLNCDVCCSFPLPQMLDAHKKHGGMGTILVVKVSPESASEFGELVADPVTNELLHYTEKPETFVSDLINSGVYIFTPDIFTAIEGVSSQRKDRANLRRVSSFEAMQQDTRSLPANYVRLDQDILSPLAGKKQLYIYETMDFWEQIKTPGMSIKCSALYLSQFRHTSPHLLANGDGIKKACIIGDVYIHPSAKVHPSAKIGPGVSISANARIGAGARLINCIVLDDVEIKENAVVLHAIVGWKSSIGRWARVQGRGDYNAKFGVTILGESVAVEDEVVVISSIVLPHKTLNVGVQDEILL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2492 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 3 279 IPR029044 -
Mtr3g2492 415 Pfam Nucleotidyl transferase 10 219 IPR005835 GO:0009058|GO:0016779
Mtr3g2492 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Mtr3g2492 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Mtr3g2492 415 Gene3D Hexapeptide repeat proteins 285 410 - -
Mtr3g2492 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 3 415 - -
Mtr3g2492 415 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 3 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2492 Mtr-Chr3 38884680 38890065 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2492 K00966 - gmx:100817201 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2492 3 38884680 38890065 Mtr3g2492 3 38884680 38890065 ECH