Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2489 ATGGCGCCACCATCTCTCGCCATTTCTCTCATCTTCTCACTCCTCATCACTTCCTTCTTCAAACCATCACTCTCTTCCACTCTCGGCGTCGACGCCATCTCCCGCACTCTTCAAATCCAGCACCGAGAACGATCACCGCCGTCCGTTCAAGAAGCCGCCGCTCGCTCTGTCCTCCTCCGCTTGCTCCCTTCCCATTCCGATTCTTTCCACTTCCGCATCATCTCCAAGAAGCAATGTGGAGGTGAATATTGTTTCACTATTAATAATCATCCTTCTTTCACAACACAAGGGAGTCCTCAAATTCTAATTGAAGGGACAACAGGAGTGGACATTGTTTCTGGTTTGCACTGGTATTTGAAGCATTGGTGTGGTTCACATATATCTTGGGACAAAACCGGTGGCTCCCAACTATTTTCAGTACCCAATGTGGGGTTGTTGCCACGTGTTCACGACGCTGGAATCTCGGTTAGGAGGCCTGTTCCATGGAGCTATTACCAGAATGCTGTCACTTCTAGCTATTCTTTTGCTTGGTGGGACTGGAAAAGATGGGAAAAGGAAATCGACTGGATGGCTTTGCAGGGTGTCAATTTGCCACTTGCATTTACGGGACAGGAGGCTATCTGGCAGAAAGTGTTCAAGGAGAAATTTAACATGAGCATTTCTAATTTGGATGATTTCTTTGGAGGCCCAGCATTTCTTGCATGGTCACGTATGGGAAACTTGCATGGATGGGGTGGGCCACTGCCACAGAGCTGGTTTGATCAACAATTAATCTTACAGAAGAAAATTCTTGCGAGAATGTACGAGCTTGGAATGACTCCTGTCCTGCCAGCTTTTTCTGGAAATGTCCCTGCTGCCCTGAAATCTATATTTCCATCAGCAAAAATAACACGCTTAGGAAATTGGTTTTCTGTTAAGAATGACCTCAAATGGACCTGCACTTATCTTCTTGATGCAACTGATCCCTTGTTCGTTGAGATCGGGAGAGCATTTGCTGAACAACAATTGCAAGAGTATGGAAGAACCAGCCACATATACAACTGCGATACCTTTGACGAGAACACCCCACCTATTGATGATCCAGAGTACATTTCTTCACTAGGTGCAGCAATCTTTAAAGGAATGCAGAGTGGTGATAATGATGCTGTTTGGTTGATGCAGGGCTGGCTATTTTCATATGATCCGTTCTGGAGACCTCCTCAAATGAAGGCCCTTCTGCATTCTGTTCCTGCGGGAAAGCTTGTGGTTCTTGACCTGTTTGCCGAAGTAAAACCCATATGGATAACCTCAGAGCAATTTTATGGTGTTCCTTACATCTGGTGTATGCTGCACAATTTTGCAGGAAACGTTGAGATGTATGGGATATTAGATGCAGTAGCATCTGGGCCAATTGAAGCACGTACAAGTGTTAACTCAACAATGGTTGGAGTTGGAATGTCGATGGAAGGTATCGAACAGAATCCTGTTGTATATGATCTGATGTCTGAAATGTCATTTCAGCACAATAAAATTGATGCTAAGGCATGGGTTGATTTGTATTCAACCAGACGATATGGAAGACAAGTTCCTTTGATACAAGAGGGATGGAATGTTTTGTATCATACCATATACAATTGCACTGATGGAGCCTATGACAAAAACAGAGATGTCATTGTAGCATTCCCAGATGTAGACCCTTCCTTACTTTCAGTTCAGCATGAACACTCTCGCCCCTATGGCAAGCCATTCTCGAGAGCAGTTAGCAAGGAAATAACTGATTCATTTGATCGACCTCACTTATGGTATTCAACATCTGAAGTAATTTATGCATTGGAGCTATTTATATCTAGTGGAAACGAACTTCCAAAAAGTAGTACATATAGGTATGATCTTGTTGATCTCACCAGACAAGTGTTAGCAAAATATGCAAATCAGCTGTTCTTTAAGGTCATTGAGGCATACCAATCAAGAGATATCCATGAAGTGACCCTACTCAGCCAAAGATTTCTTGACCTGGTGGAAGATTTAGACACGTTGTTGGCTTGCCATGATGGATTTCTTCTAGGCCCCTGGTTAGATAGTGCAATACAACTAGCTCAAAATGAAGAACAGAAGAGACAGTTTGAGTGGAATGCTAGAACACAAATCACCATGTGGTTTGACAACACAGAGGAAGAAGCCAGTCTGCTTCGTGACTATGGGAACAAGTACTGGAGTGGGCTTCTGAGTGATTATTATGGCCCAAGAGCTGCTATTTATTTTAAATATTTGAGAGAAAGCTTAGAGGCAGGCGAGGATTTCAAGCTAAAGGAATGGAGGAAGGAGTGGATAAAACTTACCAATGATTGGCAAAGCCGTAGAAATATATTTCCAGTTGTAAGCAGAGGAGATGCTTTAAACACTTCAAGGTGGCTCTTCAACAAATACCTGAACCTGAGCAATCCTGAGACACCGGGAGCTGTTTCAATGAACATTAGTCTTAAATGTATATGA 2472 0.4324 MAPPSLAISLIFSLLITSFFKPSLSSTLGVDAISRTLQIQHRERSPPSVQEAAARSVLLRLLPSHSDSFHFRIISKKQCGGEYCFTINNHPSFTTQGSPQILIEGTTGVDIVSGLHWYLKHWCGSHISWDKTGGSQLFSVPNVGLLPRVHDAGISVRRPVPWSYYQNAVTSSYSFAWWDWKRWEKEIDWMALQGVNLPLAFTGQEAIWQKVFKEKFNMSISNLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILARMYELGMTPVLPAFSGNVPAALKSIFPSAKITRLGNWFSVKNDLKWTCTYLLDATDPLFVEIGRAFAEQQLQEYGRTSHIYNCDTFDENTPPIDDPEYISSLGAAIFKGMQSGDNDAVWLMQGWLFSYDPFWRPPQMKALLHSVPAGKLVVLDLFAEVKPIWITSEQFYGVPYIWCMLHNFAGNVEMYGILDAVASGPIEARTSVNSTMVGVGMSMEGIEQNPVVYDLMSEMSFQHNKIDAKAWVDLYSTRRYGRQVPLIQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLLSVQHEHSRPYGKPFSRAVSKEITDSFDRPHLWYSTSEVIYALELFISSGNELPKSSTYRYDLVDLTRQVLAKYANQLFFKVIEAYQSRDIHEVTLLSQRFLDLVEDLDTLLACHDGFLLGPWLDSAIQLAQNEEQKRQFEWNARTQITMWFDNTEEEASLLRDYGNKYWSGLLSDYYGPRAAIYFKYLRESLEAGEDFKLKEWRKEWIKLTNDWQSRRNIFPVVSRGDALNTSRWLFNKYLNLSNPETPGAVSMNISLKCI* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2489 823 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 509 801 IPR024732 -
Mtr3g2489 823 Gene3D - 503 810 - -
Mtr3g2489 823 Gene3D - 26 152 IPR029018 -
Mtr3g2489 823 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 49 804 - -
Mtr3g2489 823 Gene3D Glycosidases 159 501 - -
Mtr3g2489 823 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 53 147 IPR024240 -
Mtr3g2489 823 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 164 500 IPR024733 -
Mtr3g2489 823 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 49 804 IPR007781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2489 Mtr-Chr3 38817937 38827591 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2489 K01205 - gmx:100791160 1479.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2489 3 38817937 38827591 Mtr3g2489 3 38817937 38827591 ECH