Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2472 ATGAAAATTTACTTCACCTTCCTGTTCTTGTCGCTCTCTTTATTCCATGTTTCTATAGCAACCATTGGCAGAACACAAGAATATTCCTATTCCAAACAAAAGACAAACCCTTTCACTCCTAAAGCCTCACTCATTCGCCATTGGAACACAAAAACCTCTAACAAACTTCCGATCCCAAATTTCTTTCTTTCCAAAGCTTCACCTCTCACACCACAACACTACGCAAACCTCATAAACCTCTTCAAACAAAAACCATCCTCATCAAATCTCCATAATACCCTCTGCTCCACACCATACTTATTCTGCTCCTTCGACCACCCAAACACACTTTACCAATCCACAAAAACAAACAAATCAGACTCAAATTTCGCCGTCTACTCAAACAAAAAATTCTCAAACTACGGCTCCGCTCGACTCGGCGGAGTCGACTCATTTAAAAACTACTCCAACGGTTTAAACACAAACAGCGACTCGTTCAAAAAATACAGCTCAGGCTCAACTCGTCGCGGTGGTGAATTCAACAGCTACGCAGAAAACGGCAATGTAGCTAACACAAACTTCACAAACTACGGTTCCGGTTCATCTTCCGGCACCGGAAACTTCAAAAGCTACGATAAACTCGTCAATGTCCCGAATCTCGGTTTCACCACCTACGACTCCGGCGCTAACAATCACAAATTATCATTCTCAAGCTACGGTAACGATACAAATTCTGGATCTCAATCATTCAACAGCTACGGAAAACGCGTTCGTAGCGGTAACAGCGATTTCATCAATTATGCAGTTAGTTCCAACATTCTTCAATCAACATTCACCGGTTACGGTGAATTAGGAACAGGAGGTGCAAACGATTCTTTCAAAGCGTACAGTTTCAACGGTAATAATCCAAAGAGCAGTTTCAAAGCTTACGGTACCGGTTCCGTTTCCGGTTCCGATACTTTTGTAAGTTACCGGAACCGCGCTAACGTCGGTGATGATTCGTTTCAAAGCTACGGTGCAAAATCGAAAGCCGGTGCTGCGTCGTTTACGAATTATGGACAATCGTTTAACGAAGGAAACGACACTTTCACTGAATATGGAAAAGGAGCTACGGGTAAAACCGCGTTTGGATTCAAATCTTATGGATTGGGACGCGCGTTTAAGTTATACAACAAAAACGGCGCGTCGTTTTCAGCGTATAACAATTTCAGCACAATCAGTGGTAAAATCGTAAATAGATTCGTTGAACCGGGTAAATTTTTCAGAGAATCGATGTTAAAGGAAGGAAACGTGATGGTTATGCCAGATATTGGAGACAAAATGCCTGCAAGGTCTTTTTTACCTTTGTCTATATCATCAAAATTACCATTTTCATCCTCGAGGTTGAGTGAGATAAAAGAAGCATTTCACGCGCGAGATGGTTCTGCGACAGAGCGCGTGATATTTAACGCGCTTAAAGAATGCGAGAGGGAACCGAGTGTGGGAGAAACAAAACGGTGCGTTGGATCAGCTGAGGGTATGATTGACTTTTCCGTTTCTATATTAGGTCCCAATGTGGTTGTGAAAACAACTGAAAATGTGAACGGGTCAAAAAGGACGGTGATGATTGGAAAAGTCGATGCAACGGACGGTGGAAAAGTGATTAAATCAGTTTCATGTCATCCGAGTTTGTACCCTTATTTACTCTATTATTGTCACTCTGTCCCTAAAGTGAGAGTTTATGAAGCTGATATTCTTGACGTGGACACTAAGTCAAAGATTAATCACGGTGTTGCCATCTGTCACATTGATACGTCATCGTGGGGTTCTAAACATGGTGCTTTTTTGGCGTTAGGGTCTGGACCTGGAAAAATTGAGGTGTGTCATTGGATTTTTGAGAATGATATGACGTGGACAACTTCTAGTTGA 1887 0.4213 MKIYFTFLFLSLSLFHVSIATIGRTQEYSYSKQKTNPFTPKASLIRHWNTKTSNKLPIPNFFLSKASPLTPQHYANLINLFKQKPSSSNLHNTLCSTPYLFCSFDHPNTLYQSTKTNKSDSNFAVYSNKKFSNYGSARLGGVDSFKNYSNGLNTNSDSFKKYSSGSTRRGGEFNSYAENGNVANTNFTNYGSGSSSGTGNFKSYDKLVNVPNLGFTTYDSGANNHKLSFSSYGNDTNSGSQSFNSYGKRVRSGNSDFINYAVSSNILQSTFTGYGELGTGGANDSFKAYSFNGNNPKSSFKAYGTGSVSGSDTFVSYRNRANVGDDSFQSYGAKSKAGAASFTNYGQSFNEGNDTFTEYGKGATGKTAFGFKSYGLGRAFKLYNKNGASFSAYNNFSTISGKIVNRFVEPGKFFRESMLKEGNVMVMPDIGDKMPARSFLPLSISSKLPFSSSRLSEIKEAFHARDGSATERVIFNALKECEREPSVGETKRCVGSAEGMIDFSVSILGPNVVVKTTENVNGSKRTVMIGKVDATDGGKVIKSVSCHPSLYPYLLYYCHSVPKVRVYEADILDVDTKSKINHGVAICHIDTSSWGSKHGAFLALGSGPGKIEVCHWIFENDMTWTTSS* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2472 628 Pfam BURP domain 413 625 IPR004873 -
Mtr3g2472 628 ProSiteProfiles BURP domain profile. 413 627 IPR004873 -
Mtr3g2472 628 SMART BURP_2 411 627 IPR004873 -
Mtr3g2472 628 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 1 627 - -
Mtr3g2472 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 1 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2472 Mtr-Chr3 38668203 38670565 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2472 - - gmx:100787394 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2472 3 38668203 38670565 Mtr3g2472 3 38668203 38670565 ECH