Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2449 ATGGGTTCTATGCAGAGTTCTCAGAAGAGCAAAGAAGAGATGGAAACTGCCATGAATAAAGCTAAGGAGATTGCCGCTTCATCCCCCGTCTTTGTCTTCAGTAAGACTTATTGTGGTTACTGCAATCGGGTCAAGGATCTACTCAAACAGCTGGGAGCAGCCCACAAGGTCATTGAATTGGATACAGAAAGTGATGGGGGTGAGATTCAAGCAGCATTAGCTGAGTGGACAGGGCAAAGGACAGTACCTAACGTGTTTATTGGAGGCAAGCACATTGGTGGTTGTGATTCTGTTTTGGAGAAACACCGGACAGGTCAATTGGTTCCCCTTCTCAATGATGCTGGAGCCATCCCGCTCAGCACTTAA 366 0.4699 MGSMQSSQKSKEEMETAMNKAKEIAASSPVFVFSKTYCGYCNRVKDLLKQLGAAHKVIELDTESDGGEIQAALAEWTGQRTVPNVFIGGKHIGGCDSVLEKHRTGQLVPLLNDAGAIPLST* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2449 121 TIGRFAM GRX_euk: glutaredoxin 30 110 IPR011899 -
Mtr3g2449 121 Gene3D Glutaredoxin 9 118 - -
Mtr3g2449 121 PANTHER GLUTAREDOXIN-C1 1 118 - -
Mtr3g2449 121 CDD GRX_GRXh_1_2_like 29 110 - -
Mtr3g2449 121 PANTHER GLUTAREDOXIN 2 1 118 - -
Mtr3g2449 121 SUPERFAMILY Thioredoxin-like 18 116 IPR036249 -
Mtr3g2449 121 PRINTS Glutaredoxin signature 30 48 IPR014025 -
Mtr3g2449 121 PRINTS Glutaredoxin signature 75 88 IPR014025 -
Mtr3g2449 121 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Mtr3g2449 121 Pfam Glutaredoxin 30 92 IPR002109 -
Mtr3g2449 121 Coils Coil 4 24 - -
Mtr3g2449 121 ProSiteProfiles Glutaredoxin domain profile. 18 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2449 Mtr-Chr3 38356636 38360052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2449 15 119 Miscellaneous Gene Families AT3G02000 39.640 2.78e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2449 K03676 - pvy:116146498 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2449 3 38356636 38360052 Mtr3g2449 3 38356636 38360052 ECH