Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2431 ATGGGCAGCGGCGAAATGGGTGTAGCTGAGAGCGGTGGCGCATCACTTCCTTCAATCGGCGCCGACGCAATGAAGCGTCGCGTAACCTACTTCTACGAACCAAGCATCGGTGATTATTACTACGGTCAAGGTCACCCAATGAAACCCCATCGTATCCGCATGGCACACAATCTCATCATCCACTACTCTCTCCACCGTCGTATGCAAATTAACCGTCCTTTCGCCGCTGCGCCGGAAGATATCCGCCGGTTTCACTCTGATGATTACGTCGAGTTCCTCTCTTCCGTTTCGCCGGAGATTGTTTCGGATAATTCACACTCTCATTATCGGCAGTTGAAGAGGTTTAACGTAGGTGAGGATTGTCCTGTTTTCGACGGGCTTTTTCCGTTCTGCCAGGCTTCTGCTGGTGGATCTATTGGTGCTGCTGTTAGGCTTAATCGTGGTGACGCTGATATTGCTATTAATTGGGCTGGTGGGTTGCATCATGCTAAGAAAGCTGAAGCTTCTGGGTTTTGTTATGTTAATGACATTGTTCTTGGGATTCTTGAGCTTCTCAAAGTTCATAGGCGTGTTCTGTATGTTGATATTGATGTCCACCACGGAGATGGCGTTGAGGAGGCATTTTACACTACTGATCGAGTGATGACTGTGTCTTTTCATAAGTTTGGTGATTTCTTCCCTGGAACTGGGCATATTAAAGACACTGGTGTGGGCCCTGGGAAGGACTATGCTCTAAATGTTCCATTGAATGATGGAATGGATGATGAGAATTTCCGTGCTCTGTTTCGTCCCATTATGCAAAAAGTCATGGATGTTTATCAACCTGATGCAGTTGTTCTTCAATGTGGAGCTGATTCTTTGTCCGGTGACAGGTTGGGTTGCTTCAACTTATCTGTGAAGGGTCATGCAGACTGCCTTCGTTTCCTTAGGTCTTTTAATGTTCCTCTAATGGTCTTGGGTGGGGGAGGATACACTGTACGGAATGTTGCTCGCTGTTGGTGTTATGAGACAGCCGTAGCAGTAGGAGTGGAGCCTAGTAACAAGTTGCCATATAATGAGTATTATGAATATTTTGGCCCAGACTATACACTTCATGTCGAACCAAACAACATGGAGAACCTAAACACACCCAAGGATATGGAAAAAATCAGGAACACTTTGCTTGAACAAATTGCCAGACTTCCTCATGCTCCCAGTGCTCCTTTTCAGACAACACCATCAACCGCAGAAGTTCCTGAAGTGGAAGAAGAGGACATGGATATAAGACCAAAACGTCAGTTGTGGAGTGGTGAAGATTATGATTCTGATCCCGATGAAGATGAGAAGGCCAATATAAGGAGCTCAAGTTTAACTTCTCATATGAGGCGCGCAGCAGATATGATGGAAGAAGATAAGCCAGAAGTTAAGCCTGGTGTGCATCCGCCATGCTAA 1431 0.4605 MGSGEMGVAESGGASLPSIGADAMKRRVTYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIIHYSLHRRMQINRPFAAAPEDIRRFHSDDYVEFLSSVSPEIVSDNSHSHYRQLKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVRLNRGDADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDTGVGPGKDYALNVPLNDGMDDENFRALFRPIMQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPSNKLPYNEYYEYFGPDYTLHVEPNNMENLNTPKDMEKIRNTLLEQIARLPHAPSAPFQTTPSTAEVPEVEEEDMDIRPKRQLWSGEDYDSDPDEDEKANIRSSSLTSHMRRAADMMEEDKPEVKPGVHPPC* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2431 476 CDD HDAC_classI 31 340 - -
Mtr3g2431 476 SUPERFAMILY Arginase/deacetylase 26 391 IPR023696 -
Mtr3g2431 476 Gene3D Histone deacetylase domain 18 406 IPR037138 -
Mtr3g2431 476 PRINTS Histone deacetylase signature 47 64 IPR003084 GO:0004407|GO:0016575
Mtr3g2431 476 PRINTS Histone deacetylase signature 80 98 IPR003084 GO:0004407|GO:0016575
Mtr3g2431 476 PRINTS Histone deacetylase signature 115 132 IPR003084 GO:0004407|GO:0016575
Mtr3g2431 476 PRINTS Histone deacetylase signature 136 156 IPR003084 GO:0004407|GO:0016575
Mtr3g2431 476 PRINTS Histone deacetylase signature 177 193 IPR003084 GO:0004407|GO:0016575
Mtr3g2431 476 PRINTS Histone deacetylase signature 236 249 IPR003084 GO:0004407|GO:0016575
Mtr3g2431 476 PRINTS Histone deacetylase signature 253 271 IPR003084 GO:0004407|GO:0016575
Mtr3g2431 476 PANTHER HISTONE DEACETYLASE 6 12 443 - -
Mtr3g2431 476 MobiDBLite consensus disorder prediction 395 476 - -
Mtr3g2431 476 PIRSF HDAC_I_euk 13 470 IPR003084 GO:0004407|GO:0016575
Mtr3g2431 476 PRINTS Histone deacetylase superfamily signature 158 181 IPR000286 -
Mtr3g2431 476 PRINTS Histone deacetylase superfamily signature 190 205 IPR000286 -
Mtr3g2431 476 PRINTS Histone deacetylase superfamily signature 275 285 IPR000286 -
Mtr3g2431 476 PANTHER HISTONE DEACETYLASE 12 443 - -
Mtr3g2431 476 MobiDBLite consensus disorder prediction 456 470 - -
Mtr3g2431 476 MobiDBLite consensus disorder prediction 417 432 - -
Mtr3g2431 476 Pfam Histone deacetylase domain 45 338 IPR023801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2431 Mtr-Chr3 38127149 38133283 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2431 K06067 - gmx:100801159 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2431 3 38127149 38133283 Mtr3g2431 3 38127149 38133283 ECH