Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2412 ATGCAAGACTCAATTGGAATTCCTGCATGTTTCTCTTCTGCAAGTGATGATCATCATCATCATGGAGCTGTGATACGTTCAGGTAAAACCGTTTACATGTCAGTATACAGAACAAAGTTAGCTGGTCACTGCCGTTTGATCACAATCACATGGTGCAAAAACTTGATGCTTCATGGCTTATCAGTAACAGTGGAAAACCCTGAAAAGGAAACTCAATATAGCTGCAAGGTTGAGCTAAAGCCATGGTACTTTTGGAGGAAACAAGGTTCAAAACGGTTCACGGTAGATGGAAAAGCAGTTGATGTCTTTTGGGACCTTAAATCTGCAAAATTCAATGGTGAAACAGAACCAACTTCAGAGTACTATGTAGCAGTGGTTTGTGATCAAGAGGTTGTGTTACTTCTTGGTGATCTAAAGAAAGAAGCTTACAGAAGAACTGGATGTAGACCATCACTCATTGATCCAATTCTTGTTTCCAAAAAGGAACACATATTTGGTAAGAGGAAGTTTTCAACTAAAGCTAAGTTTCATGAGAAAGGTAGGTGTCATGAGATTTCTATAAAGTGTAAGAACAAAGGAAGTAATAGTGGTAATAATGTTGTTGGAGATGGAGATTCTGTGATGATTGGTGGTGGTGTTCAAGTTCAACCAGAAATGGAGATAAGATTTGATGGGCATTTGGTGGTTCATGTGAAGCACTTGCAATGGAAATTTAGAGGGAATGAATTGATTCATCTCAACAAAATGAGAGTTGAGGTATATTGGGATGTTCATGATTGGTTATTTAGTCCTGGTTTAAAACATGCTTTGTTCATTTTTAAGCCTGTTTTTACATGTCATTCTATGTCACCATTTTCTTTATTTTCACCATCTTTGTCATGTTCATCTTCTTCCACTACTCCATTATCAAATGAGACAAGGAGTAGTACTTGTGATTCAGTGGAGGGCCGTAGTGTCAGTGATTCATTATCATCCTCATCAGAGTATTGCTTGTTTCTATATGCTTGGAAGGTTGAATGA 1020 0.3775 MQDSIGIPACFSSASDDHHHHGAVIRSGKTVYMSVYRTKLAGHCRLITITWCKNLMLHGLSVTVENPEKETQYSCKVELKPWYFWRKQGSKRFTVDGKAVDVFWDLKSAKFNGETEPTSEYYVAVVCDQEVVLLLGDLKKEAYRRTGCRPSLIDPILVSKKEHIFGKRKFSTKAKFHEKGRCHEISIKCKNKGSNSGNNVVGDGDSVMIGGGVQVQPEMEIRFDGHLVVHVKHLQWKFRGNELIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPVFTCHSMSPFSLFSPSLSCSSSSTTPLSNETRSSTCDSVEGRSVSDSLSSSSEYCLFLYAWKVE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2412 339 PANTHER EXPRESSED PROTEIN 1 339 IPR008586 -
Mtr3g2412 339 Coils Coil 337 339 - -
Mtr3g2412 339 MobiDBLite consensus disorder prediction 298 321 - -
Mtr3g2412 339 Pfam Plant protein of unknown function (DUF868) 28 337 IPR008586 -
Mtr3g2412 339 PANTHER OS01G0909400 PROTEIN 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2412 Mtr-Chr3 37921493 37923328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2412 7 339 EF-hand Containing Proteins AT5G28150 37.982 3.01e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2412 - - gmx:100779755 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2412 3 37921493 37923328 Mtr3g2412 3 37921493 37923328 ECH
Mtr4g3758 4 51372072 51374205 Mtr3g2412 3 37921493 37923328 PCT