Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2404 ATGTTCATAGTGAAAAACATGATCCTGTCATACACTAAAATCATGATTATTATCCTATTCTTCTTGGTTTGTGTTGGACTAAGCAATGGTGCCAATCAAAAAATACCCTTCCAAGGTAGAGAAGGACAATGGCAACTGCTTCTCAACAACACAGGCGTAGTTGGCATGCATATGGCCTTAACCTACAAAAATACTGTCATCATGTTTGATCAAACTGGTGCAGGACAATCTCGTTACAAACTTCGCAAACGCTTCAACAACGGCACCAGGTGTACAACAAACCAGCATGATTTAACCGATTCAACTTGTTATGCTCATTCAGTAGAGTATGATATCAGTGCCAATAGAATAAGACCTTTGAGACTTGACACTGATCCTTGGTGTTCCTCTGGCTCTTTCCTAAGCAATGGAACACTTCTACAAACAGGAGGTTATCATCAAGGTGCCAAAAGGGTTAGATTCTATAGACCTTGTGGGAATAATCACCAGTGTGATTGGATACAATCAAGGAAATCTTTATCTGATGAAAGGTGGTATGCTTCTAGTCAGATTCTACCAGAACATGACAGAGTTGTTCTTGTTGGTGGAAGAGGAGTTTTCACATATGAATTTGTTCCAAAACATAGTCCTAATGAAAAAGCTTTTGATCTTCCGTTTCTGCACCAAACCAATGACAGAAACTCTGAAGGGAACAACCTTTATCCATTCACTCACCTTTCATCAGATGGAAACTTGTTCATTTTCGCCAACCGCGATTCCATCTTACTCAACTTGAGACGCAACAAAGTAATCAAGACATTCCCTCGGATTCCAGGAAATGGGTCAAGAAACTACCCGAGCTCCGGCTCATCAGTGTTACTCCCATTAGACCATAAAGACAAGTTTCAGAAAGTTGAAGTTATGGTATGTGGAGGTTCAGCTACAGGAGCACTCAGAGCTGCTAGAAGTCAAAGATTCGTTGAAGGTTTAAGATCTTGTGGGAGAATGGTGATCACTGGGAATAAGCACAGTTGGGAAATGGATTACATGCCGAAACCGCGTTTCTTACATGACATGTTGATTCTACCTACAGGGAACATCTTGATTATAAATGGTGCTAAACATGGTTGTGCAGGATATGACAATGCTAGAAATGCTTCACGTGAGCCTTATCTTTATAGTCCAAATAAAAGACTAGGGAAAAGGTTCAGTGTCCTTAAGAGAACAATGATAGCAAGAATGTATCATTCATCGGCAACTCTTCTTCCTGATGGGAGAGTATTAGTTGCTGGTGGTAACCCACATGGGAGATACACCTTTAACAATGTGGCATATCCAACTGAATTGAGACTTCAAGCATTTGTTCCACATTACATGGAAAAAAGGTATCATGCTTGGAGGCCAAGTAACTTGACCATAGAAAATCATGCAATTGGGTATGGCAAAGAGTTTAGGGTGAGGTTTTTGTTGGGGAGGAGGCCAAGTGATGAAGTGAAGTTTAGCGTTTATTCGCCACCGTTTACTACTCATTCTTTTTCAATGAATCAGAGGATGTTGAACCTGAGATGCAAGAGAATGGTGAGAAGTAGTGAGGGATGGGTGAATGCAGTATTGGAAGCTCCACCATCATCTGTTGTTGCTCCTTCTGGTTATTACTTGTTCACAGTTGTGAATGGAGGTATTCCAAGCATGTCTCAGTGGATTCAGTTTGCACATGCCTAG 1701 0.4098 MFIVKNMILSYTKIMIIILFFLVCVGLSNGANQKIPFQGREGQWQLLLNNTGVVGMHMALTYKNTVIMFDQTGAGQSRYKLRKRFNNGTRCTTNQHDLTDSTCYAHSVEYDISANRIRPLRLDTDPWCSSGSFLSNGTLLQTGGYHQGAKRVRFYRPCGNNHQCDWIQSRKSLSDERWYASSQILPEHDRVVLVGGRGVFTYEFVPKHSPNEKAFDLPFLHQTNDRNSEGNNLYPFTHLSSDGNLFIFANRDSILLNLRRNKVIKTFPRIPGNGSRNYPSSGSSVLLPLDHKDKFQKVEVMVCGGSATGALRAARSQRFVEGLRSCGRMVITGNKHSWEMDYMPKPRFLHDMLILPTGNILIINGAKHGCAGYDNARNASREPYLYSPNKRLGKRFSVLKRTMIARMYHSSATLLPDGRVLVAGGNPHGRYTFNNVAYPTELRLQAFVPHYMEKRYHAWRPSNLTIENHAIGYGKEFRVRFLLGRRPSDEVKFSVYSPPFTTHSFSMNQRMLNLRCKRMVRSSEGWVNAVLEAPPSSVVAPSGYYLFTVVNGGIPSMSQWIQFAHA* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2404 566 Pfam Galactose oxidase-like, Early set domain 460 562 IPR015202 -
Mtr3g2404 566 PANTHER SECRETED PROTEIN-RELATED 4 565 - -
Mtr3g2404 566 SUPERFAMILY E set domains 456 562 IPR014756 -
Mtr3g2404 566 Gene3D Immunoglobulins 459 566 IPR013783 -
Mtr3g2404 566 Pfam Glyoxal oxidase N-terminus 56 305 IPR009880 -
Mtr3g2404 566 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 4 565 - -
Mtr3g2404 566 SUPERFAMILY Galactose oxidase, central domain 108 452 IPR011043 -
Mtr3g2404 566 Gene3D - 38 456 IPR037293 -
Mtr3g2404 566 CDD E_set_GO_C 460 562 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2404 Mtr-Chr3 37878658 37880879 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2404 - - mtr:MTR_3g075520 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2404 3 37878658 37880879 Mtr3g2404 3 37878658 37880879 ECH