Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2403 ATGACTATTTCGGTTGTACCTAAAGTGAAGGACGAGTGCCTTATGGTGAGGGGCAACGTGATTCTCACACATGTCCCTCAAAACATTGTTGTTTCACCTGTTTCATCAGGTTCTGCTTTTTTAGGTGCAACTTCTCCTATTCCTAGTTCCCGTCATGTCTTCACCCTCGGCACTCTCCGGGGATATAGGTTGCTATCTTTATTTAGAGTCAAAATATGGTGGATGATACCACGTGTTGGGAAATCCGCAAGCGATGTTCCAATGGAAACTCAATTGCTTCTAGTGGAAGCAAGAGAAGAGTCTGCTCTTGAGACAGAATTTTCTTCTGATTCTGAAGAGACAGAAGAAGAGAACACTTCCTATATTCTCTTCTTGCCTGTGTTGGATGGAGCGTTTCGCGCAACTTTGCAAGGAACCGCGTTAAACGAGCTCCAATTCTGCGTTGAAAGTGGAGATGCCTATGTTCAAACTTCTCAATCACTTGAGGCAGTATTTGTAAATTCAGGGGACAATCCATTTGAGCTAATCAAAGATTCTATCAAGATATTAGAGAAACACAAAGGAACTTTCTGTCATCTTGAAAACAAGGAAATTCCTGTACATCTTGATTTGTTTGGATGGTGCACTTGGGATGCATTCTACACTCAAGTAAATCCACAAGGAATAAAAGAGGGCATTCAAAGTCTCTCAAGTGGAGGTTTTACACCAAAGTTTATCATCGTTGATGATGGATGGCAAGAGACGCACAATGAATTTTTCAAAGAAGGTGAACCAATAGTTGAAGGAACCCAGTTTGCAACAAGGCTAATAGACATTAAGGAAAATGTAAAGTTCAGAAGTGCAGGCTCCAACAATTCTTGCAACAACCTCCATGATTTTGTTCACTCTATCAAACAGAATTTGAGTGTAAAATACGTTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGAGTACTCCCGTCTTCAAACGCGATGAAAAAATATAATCCGAAGCTTGTATATCCAATTCAGTCAGCTAGTACCACAGGGAACCTTAGAGATATAGCCATGGACAGCTTGGAAAAATATGGAGTGGGAATGATAGATCCATCAAAATTTTACGACTTTTACAATGACTATCACAGTTATCTTGCTAGCTGTGGCGTCGATGGAGTCAAAGTAGATGTCCAAAATTTGATAGAAACATTAGGTTCAGGGTACGGTGGACGTGTTTCATTAACAAAACGGCATCAAGAAGCATTAGAGACATCAATAGCAAGGAACTTTGAGCACAATAACCTCATTTGTTGCATGTGTCACAACTCTGATTCAATTTACAGTTCAAAGAAGAGTGCAGCAGCAAGAGCATCTGAGGATTTCATGCCAAGGGAACCAACATTTCAAACCTTACATGTTGCGTCGGTAGCTTTTAACAGTCTTCTTCTGGGAGAGATATTTGTGCCAGACTGGGACATGTTCCAAAGCAAGCACAAGACGGCTGAGTTCCACGCTGCAGCAAGAGCAATAGGTGGTTGTGCAGTATATGTTAGTGATAAGCCTGGCAATCATGATTTTGATATCTTGAAGAAGCTAGTACTGCCTAATGGATCAGTATTGAGAGCTCTTTATGCTGGCCGTCCTACTCGAGATTGTTTGTTTCAAGATCCAGTAATGGATGGTAAAAGTCTGCTGAAAATTTGGAACTTGAATAAGCTGACTGGGGTGATAGGCGTCTTTAATTGCCAAGGAGCAGGAAGCTGGCCAATGAAACCATCCGAAGCCACACCACCGACACACTTAACCATTTCAGGAAAAGTTAAACCACTCGATGTTGAGTTTCTTGAAGAGGTTGCTGGTGAAAATTGGAATGGAGACTGCATACTATATGCCTTCAACGCAGGCTTGCTTTCCAAGCTACCGAGTAAAGGAAAACTAGAAGTGTCCTTGGAGACTCTTCAATGTGAAGTATATACAGTATCTCCAATCAGGGTATTTGGTCATGATGTGCAATTTGCACCAATTGGATTGCTTGACATGTACAATTCAGGAGGAGCTGTAGAAGAGTTGTCCTGCATAAGGGATGCTGCAAATTGCACAATAGTAAACATCAAAGGTAGAGGATGTGGCCGATTTGGAGCGTACTCCAATGTTAGGCCGAAACGTTGCTTGGTGGATATGAAAGAGGAGGAGTTTTCCTACAACTCTGAAGATGGATTAGTGATCATTAAACTTGATGGTGAAGGCAACTCAAGGGACATAGAATTTGTATTCTGA 2256 0.4153 MTISVVPKVKDECLMVRGNVILTHVPQNIVVSPVSSGSAFLGATSPIPSSRHVFTLGTLRGYRLLSLFRVKIWWMIPRVGKSASDVPMETQLLLVEAREESALETEFSSDSEETEEENTSYILFLPVLDGAFRATLQGTALNELQFCVESGDAYVQTSQSLEAVFVNSGDNPFELIKDSIKILEKHKGTFCHLENKEIPVHLDLFGWCTWDAFYTQVNPQGIKEGIQSLSSGGFTPKFIIVDDGWQETHNEFFKEGEPIVEGTQFATRLIDIKENVKFRSAGSNNSCNNLHDFVHSIKQNLSVKYVYMWHALAGYWGGVLPSSNAMKKYNPKLVYPIQSASTTGNLRDIAMDSLEKYGVGMIDPSKFYDFYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKRHQEALETSIARNFEHNNLICCMCHNSDSIYSSKKSAAARASEDFMPREPTFQTLHVASVAFNSLLLGEIFVPDWDMFQSKHKTAEFHAAARAIGGCAVYVSDKPGNHDFDILKKLVLPNGSVLRALYAGRPTRDCLFQDPVMDGKSLLKIWNLNKLTGVIGVFNCQGAGSWPMKPSEATPPTHLTISGKVKPLDVEFLEEVAGENWNGDCILYAFNAGLLSKLPSKGKLEVSLETLQCEVYTVSPIRVFGHDVQFAPIGLLDMYNSGGAVEELSCIRDAANCTIVNIKGRGCGRFGAYSNVRPKRCLVDMKEEEFSYNSEDGLVIIKLDGEGNSRDIEFVF* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2403 751 PANTHER - 1 750 IPR008811 -
Mtr3g2403 751 SUPERFAMILY (Trans)glycosidases 202 533 IPR017853 -
Mtr3g2403 751 Pfam Raffinose synthase or seed imbibition protein Sip1 9 737 IPR008811 -
Mtr3g2403 751 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 750 - -
Mtr3g2403 751 Gene3D Aldolase class I 202 528 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2403 Mtr-Chr3 37872500 37876695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2403 1 738 Glycoside Hydrolase AT1G55740 48.000 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2403 - - gmx:100816978 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2403 3 37872500 37876695 Mtr3g2403 3 37872500 37876695 ECH