Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2399 ATGGCTAGTGCTAATCCTCGCCAGTTATCAGCTGCTTCTAACAGAATGCAGCTAAAGAAGGAGAGACGTATGTTCTCTACTTCTGATGATAGTGCCATGACGAAACAAGTTCAGGCCACTCATGCTCCTGATGGTCGTGAAATCGATGTCAAACCACTTATCCAAATTGTTGATGAAATCTTGATTCAAATCATTGCTCGAAGTGTTGAGGGTCATGAACATGTTAAACATGAGCAAGATACATTGGAAACTTCTGCTGCTTTGGCTGAATTTGACATGCTTGATGCGCTGGCTTTTATCATTAACAAAATTTCGTGTGAGCTATCTTGCAAATGCTCTGGAGGTGGAGATGCACATGCGTCAACAATGGTGTTACTGAATTACCTATCTAGCTACCCATGGCATGCAAAAGTTGTGTTAACCTTAGCAGCATTTGCTGTTATTTTTGGAGAGTTTTGGCTTGTTGCTCAATCAAGTGTTTCAAACACACTTGCAAAATCTGTGGCTCTCCTTAAGCAACTACCTGACATTGTAGAGAATTCTGTTTCATTGAGACCACAATTTGATGCACTCAATAAGCTTGTGAAGGCTGCACTTGATGTTACCATGTGCATTGTTGAATTCAAGGATTTACCATCTGAATATATTTCAGAAGATGCTCCTCCTATGTCTGTTGCAAGTGCTCATATTCCTATTGCTACCTATTGGGTCATCAGAAGTATTGTGGCTTGTGCTTCACAAATTGCAAGTCTCATAGGGATGAGAAATGAGGCTATTTCATCAGCCTCAGAAGCATGGGAGTTATCTAGTCTTGCTCACAAAGTCACTAGTATATATGAGCATCTCAAGAACCAACTTGCTCTTTGCTACCAATCTATAGATGAAAAGAAGCATATTGAGGCATTTCTCTATCTGGTACATCTTTTCGAGACGGTTCATGTAGACAACATGAAAATTCTGAGAGCCTTGATTTATGCAAAGGACGATATTCCCCCGCTTATAGATGGAACTACAAAATTAAGGGTTAGTCTTGAAGTACTAAGGAGGAAACATGTGTTACTTCTGATATCAGATCTTGATCTTTCACTAGAAGAGATTATGATACTTGATAATTTATACAAAGATGCAAGATCTAGGGGCGAGACGCACTATGAGATGGTATGGATTCCAGTTGTGGACAAAGCAACATGGAATGAAGTGAATAAGCAAAAGTTTGAGTATCTTCAATCAACAATGCCGTGGCACAGTGTTCGCGACCCTTTCATTATTGAACCATCAGTGATTAAGTATATCAAAGAAGTGTGGAATTACACAAAGAGAGCTATTCTAGTAGCTCTTGATCCACAAGGAAGGTTGTCCTCCCAAAATGCTCTTCACATGATATGGATTTGGGGAAATTTGGCATTTCCATTCACAAGTGAGAAAGAAGAATCCTTGTGGAAGCAAGAGATTTGGAGCCTCGAGTTGCTTGTTGATGGCATTGATCCTGCACTTTTGGACTGGATGACAGAAGGAAAAATCATATGTCTATATGGAGGCGAAGATCTAGAGTGGATAGAAACATTCACAAAAACAGCAATGAATGTAGCAAGAACTAGCAACTTCGAGTTAGAGATGGTCTATGTAGGAAAAAGCAATGCAAAAGAGAGAATGCAGAGAATGATCACTACCTTCAACAACAAGAAATTCAGTTACTTTTTTCCAAACGTGACATCAATTTGGTTCTTTTGGGCAAGACTTGAGAGCATGTTGTACTCAAAACTACAACATGGTAGGACAGTTGAAAATGACAAGATCATGAGTGAAGTGATGACAGTGCTAAGCTTCGACGGTAGTGATCGAGGTTGGGCAATATTCTGTAGAGGACCATCTGAAATGGCTAGGGCTAAAGGTGACACTGCTTTAACAAGTTTGAGAGATTTTGATAAATGGAAACATAGGATTGAACAAGATGGTTGGGTTCCAGCATTGAATGATTATATTAAGGAAATTCAGCAACCACATCATTGTAATAGGCTTATTCTTCCTGGGAGTACTGGTGGAATACCTCAGAAAGTTGTTTGTGCTGAATGTGGTCGTCAAATGGAGAAATATTTCATGTATCGTTGCTGTGTGGAGTGA 2121 0.3965 MASANPRQLSAASNRMQLKKERRMFSTSDDSAMTKQVQATHAPDGREIDVKPLIQIVDEILIQIIARSVEGHEHVKHEQDTLETSAALAEFDMLDALAFIINKISCELSCKCSGGGDAHASTMVLLNYLSSYPWHAKVVLTLAAFAVIFGEFWLVAQSSVSNTLAKSVALLKQLPDIVENSVSLRPQFDALNKLVKAALDVTMCIVEFKDLPSEYISEDAPPMSVASAHIPIATYWVIRSIVACASQIASLIGMRNEAISSASEAWELSSLAHKVTSIYEHLKNQLALCYQSIDEKKHIEAFLYLVHLFETVHVDNMKILRALIYAKDDIPPLIDGTTKLRVSLEVLRRKHVLLLISDLDLSLEEIMILDNLYKDARSRGETHYEMVWIPVVDKATWNEVNKQKFEYLQSTMPWHSVRDPFIIEPSVIKYIKEVWNYTKRAILVALDPQGRLSSQNALHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPALLDWMTEGKIICLYGGEDLEWIETFTKTAMNVARTSNFELEMVYVGKSNAKERMQRMITTFNNKKFSYFFPNVTSIWFFWARLESMLYSKLQHGRTVENDKIMSEVMTVLSFDGSDRGWAIFCRGPSEMARAKGDTALTSLRDFDKWKHRIEQDGWVPALNDYIKEIQQPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2399 706 MobiDBLite consensus disorder prediction 21 42 - -
Mtr3g2399 706 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 11 705 - -
Mtr3g2399 706 Pfam Sieve element occlusion N-terminus 28 313 IPR027942 -
Mtr3g2399 706 Pfam Sieve element occlusion C-terminus 475 704 IPR027944 -
Mtr3g2399 706 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 11 705 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2399 Mtr-Chr3 37836421 37840457 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2399 - - gmx:100811452 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2399 3 37836421 37840457 Mtr3g2399 3 37836421 37840457 ECH