Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2393 ATGGCTACAAGTGAAGGCGGAAACGGGAACCACAACACTGCCTTTGACCCGGATTTGGATATTCCGGATAACCCGGATGACGAGTTTGCTGAGTTTGGTGCGGGTTGTTTCTGGGGTGTGGAGCTTGCTTTTCAGCGAGTTCCGGGAGTGGTGAAGACTGAGGTCGGATATACACAGGGTCATACACCGGATCCTAATTACAAACTGGTTTGTACTGGAACTACCAATCATGTGGAAGTTGTTCGGGTTCAGTTTGACCCGAAACTGTGTCCTTACACGAATCTATTGGATCTGTTTTGGTCACGACATGACCCCACTACCCTGAATCGTCAGGGAGGTGATGTAGGTGCACAATATAGATCAGGAATATATTACTACAATGAAACACAGTCTCGTTTAGCCCAAGAATCAAAAGAAGCTAAACAATTGGAACATAAGGACAAGATTGTAACTGAAATTCTTCCAGCAAAGAGGTTTTATAGAGCTGAGGAATATCATCAGCAGTATTTGGAAAAGGGTGGAGGCAAAGGCCGAGGTCACGGTCAGTCTGCTCAAAAGGGCTGTAATCATCCCATAAGGTGCTATGGATGA 591 0.4569 MATSEGGNGNHNTAFDPDLDIPDNPDDEFAEFGAGCFWGVELAFQRVPGVVKTEVGYTQGHTPDPNYKLVCTGTTNHVEVVRVQFDPKLCPYTNLLDLFWSRHDPTTLNRQGGDVGAQYRSGIYYYNETQSRLAQESKEAKQLEHKDKIVTEILPAKRFYRAEEYHQQYLEKGGGKGRGHGQSAQKGCNHPIRCYG* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2393 196 MobiDBLite consensus disorder prediction 1 24 - -
Mtr3g2393 196 Pfam Peptide methionine sulfoxide reductase 31 173 IPR002569 GO:0008113
Mtr3g2393 196 Gene3D Peptide methionine sulphoxide reductase MsrA 17 196 IPR036509 GO:0008113
Mtr3g2393 196 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 29 172 IPR002569 GO:0008113
Mtr3g2393 196 Coils Coil 126 146 - -
Mtr3g2393 196 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 9 196 - -
Mtr3g2393 196 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 9 196 - -
Mtr3g2393 196 SUPERFAMILY Peptide methionine sulfoxide reductase 24 175 IPR036509 GO:0008113
Mtr3g2393 196 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2393 Mtr-Chr3 37800604 37801491 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2393 K07304 - gmx:100527085 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2393 3 37800604 37801491 Mtr3g2393 3 37800604 37801491 ECH