Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2386 ATGGCTGAGAAGTTGGGTTCAGAAGAGAGGTCGTCAGGGATAGGGATGAAGAGAAAACAATTCGCTGTTTTGGCTGACCTCAACATCGATCCCCCTGAAGCCGATGACGACGAAGACGACAATAATCATTCTTCTTCACTTCTTCCTCCTCCACTTCCACCACATACTGAAATCACCAGGTTGATAAATGATGAAAACAGTCAAGATAAGAGTTTGTTGTCCAAAGACACCAATAGCAACGAAGGTGAAGGTAAATTGTTGAACAAATTGGGGAAATGCCGTTCCAAACCTAGCAAGACGGATTCTTCTATTGACTGTGGAGCTGATGCGGATGGTGATCAACATGTTCAAGGGGCTCCTTCAGCAAGGGAAGAAAAAGTTAGCAGCATGAAGACTGGATTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCATGCTCATTTTATACTTGGCTTGATGTACCAAAGATTAAACCAACCTCAAAAGGCTATATTGGCTTATGAGAAGGCAGAAGAGATATTACTCAGGCCAGAGGTTGAGATTGATAGGGCAGAGTTCCTTGCTTTAGTTCAAATTCACCATGCACAGTGCCTGATAATAGAAAGTTCATCAGAAAATAGTTCAGACCAAGAACTTGAACCTCACGAACTGGAGGAAATTATTTCTAAACTGAAAGAATCAACGCAATCGGATATCAGGCAGGCAGCTGTATGGAATACACTGGGTTTTATCCTTCTTAAAACTGGCCGTGTGCAGAGTGCTATCTCAGTTTTGTCATCCTTGTTGGCCATTTCACCAGAGAACTATGATTGCCTTGGTAATCTTGGGATAGCTTACCTTCAAATAGGAGATTTGGAATTATCTGCGAAGTGTTTCCAAGAGTTGATACTAAAAGATCAAAACCATCCTGCAGCTTTGGTCAATTATGCTGCTCTCCTTTTGTGTAAAAATGCTTCAGTTGTAGCAGGTGCTGGTGCAAATGCTGCAGAAGGTGCTTCGGCAGAGCAATCTATGGCTGCTAATGTTGCTAAGGAATGTTTGTTAGCTGCAATTAAAGCAGATGGAAAATCAGCCCATATTTGGGCAAATCTTGCCTATGCATTTTCTATTACTGGGAATCATCGGATTTCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTGGAACCTAATTGCATGTCTACTCGATATGCTGTAGCAAGCCATCGAATAAAGGAGGCAGAAAGATCTCAAGATCCTAGTGAATTGCTTTCATCTGCTGGAAATGAGATGGCTTCCATAATAAGAGATGGTGATTCATCCCTGGTTGAGCTTCCAATAGCATGGGCCGGGCTTGCAATGGTCCACAAGGCTCAGCATGAGATATCAGCAGCATACGAAAGTGAACAGGATGGGCTGAAGGAAATTGAAGAATGTGCTGTTTCCAGTCTAAAGCAGGCCATAGCGGAAGATCCAGATGATGCAGTTCAGTGGCACCAACTTGGCCTTCACAGTCTTTGTGCTAGGGAATTCAAAACATCACAAAAATACCTCAAAGCTGCTGTTGCCTGTGACAAGGGTTGCAGCTATGCATGGTCTAACCTCGGTGTCTCGCTTCAACTATCAGAAGAACAATCACAAGCTGAAGAAGTATACAAATGGGCTTTGTCTTTGGCAACAAAACAAGAAGCACATGCTATACTATCCAATATGGGAATTCTCTATCGCCAGCAGAAAAAATATGAACTTGCAAAGGCTATGTTTACAAAGTCACTTGAACTTCAACCTGGATATGCTCCTGCATTCAACAATCTGGGTCTTGTTTTTATTGCAGAGGGTCTGTTAGAAGAGGCCAAGCATTGTTTTGAGAAAGCACTCCAATCAGATTCAATGCTGGATGCAGCCAAGTCTAACTTGATTAAGGTTGCCACAATGTCGAAGATATGCAAAGACCTTTCCTCATGTACTCTTAAAGAATGA 1959 0.4262 MAEKLGSEERSSGIGMKRKQFAVLADLNIDPPEADDDEDDNNHSSSLLPPPLPPHTEITRLINDENSQDKSLLSKDTNSNEGEGKLLNKLGKCRSKPSKTDSSIDCGADADGDQHVQGAPSAREEKVSSMKTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAILAYEKAEEILLRPEVEIDRAEFLALVQIHHAQCLIIESSSENSSDQELEPHELEEIISKLKESTQSDIRQAAVWNTLGFILLKTGRVQSAISVLSSLLAISPENYDCLGNLGIAYLQIGDLELSAKCFQELILKDQNHPAALVNYAALLLCKNASVVAGAGANAAEGASAEQSMAANVAKECLLAAIKADGKSAHIWANLAYAFSITGNHRISSKCLEKAAKLEPNCMSTRYAVASHRIKEAERSQDPSELLSSAGNEMASIIRDGDSSLVELPIAWAGLAMVHKAQHEISAAYESEQDGLKEIEECAVSSLKQAIAEDPDDAVQWHQLGLHSLCAREFKTSQKYLKAAVACDKGCSYAWSNLGVSLQLSEEQSQAEEVYKWALSLATKQEAHAILSNMGILYRQQKKYELAKAMFTKSLELQPGYAPAFNNLGLVFIAEGLLEEAKHCFEKALQSDSMLDAAKSNLIKVATMSKICKDLSSCTLKE* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2386 652 MobiDBLite consensus disorder prediction 25 128 - -
Mtr3g2386 652 Gene3D Tetratricopeptide repeat domain 130 179 IPR011990 GO:0005515
Mtr3g2386 652 ProSiteProfiles TPR repeat profile. 236 269 IPR019734 GO:0005515
Mtr3g2386 652 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 11 649 - -
Mtr3g2386 652 MobiDBLite consensus disorder prediction 65 84 - -
Mtr3g2386 652 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 11 649 - -
Mtr3g2386 652 Gene3D Tetratricopeptide repeat domain 330 429 IPR011990 GO:0005515
Mtr3g2386 652 ProSiteProfiles TPR repeat profile. 558 591 IPR019734 GO:0005515
Mtr3g2386 652 SUPERFAMILY TPR-like 473 622 IPR011990 GO:0005515
Mtr3g2386 652 Pfam Tetratricopeptide repeat 145 174 IPR019734 GO:0005515
Mtr3g2386 652 Pfam Tetratricopeptide repeat 359 392 IPR019734 GO:0005515
Mtr3g2386 652 Gene3D Tetratricopeptide repeat domain 558 636 IPR011990 GO:0005515
Mtr3g2386 652 Pfam Tetratricopeptide repeat 559 620 - -
Mtr3g2386 652 Pfam Tetratricopeptide repeat 246 305 - -
Mtr3g2386 652 Gene3D Tetratricopeptide repeat domain 213 329 IPR011990 GO:0005515
Mtr3g2386 652 SUPERFAMILY TPR-like 142 395 IPR011990 GO:0005515
Mtr3g2386 652 ProSiteProfiles TPR repeat profile. 592 625 IPR019734 GO:0005515
Mtr3g2386 652 Gene3D Tetratricopeptide repeat domain 470 557 IPR011990 GO:0005515
Mtr3g2386 652 SMART tpr_5 522 555 IPR019734 GO:0005515
Mtr3g2386 652 SMART tpr_5 439 472 IPR019734 GO:0005515
Mtr3g2386 652 SMART tpr_5 236 269 IPR019734 GO:0005515
Mtr3g2386 652 SMART tpr_5 558 591 IPR019734 GO:0005515
Mtr3g2386 652 SMART tpr_5 592 625 IPR019734 GO:0005515
Mtr3g2386 652 SMART tpr_5 270 303 IPR019734 GO:0005515
Mtr3g2386 652 SMART tpr_5 488 521 IPR019734 GO:0005515
Mtr3g2386 652 SMART tpr_5 359 392 IPR019734 GO:0005515
Mtr3g2386 652 SMART tpr_5 145 178 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2386 - - gmx:100820184 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2386 3 37730956 37736592 Mtr3g2386 3 37730956 37736592 ECH