Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2385 ATGAAACGGTTTTTCAAAGTAATAGAGAAAGATTCAGAGAAATGTTCAAAGAAACCCAAAGAAAACGAAAATGAAGAAGAAAAAAAACAAGACGAAAACGAAGAAGAAGCAACGAAGAAGGAGCCATTGAAATTCATGACATGGAACGCCAACAGTTTACTCCTTCGCGTGAAGAACAACTGGTCAGAATTCAGCAACTTCATCACCACCTTCGATCCCGACGTTATCGCCATTCAAGAAGTTCGTATGCCCGCTGCTTCTTCTTCTTCTTCCAATTCCAAATCCGCTCCTAAAAATCAAGCTGAAGTTAAAGATGATACTAACGCTGCTAGGGAAGAAAAAAGGATATTGATGCGTGCACTTTCAAATCCACCGTTTGGGAACTATCATGTCTGGTGGTCTCTTGCAGAATCAAAGTATGCAGGGACAGCACTATTTGTGAAAAAATGTTTCAAGCCCAAAAGTGTTGTTTTCAATCTTGATAAAATAGCTTCAAAGCATGAACCAGATGGCCGAGTAATCTTAGTTGAATTTGAAACACTTCGTTTATTGAATACATATGTACCAAATAATGGGTGGAAAGAGGAGCCAAACTCATTTCAAAGGAGAAGAAAATGGGATAAAAGAATCCTGGAATTTGTTAACCAAAATTCAGACAAGCCTTTGATATGGTGTGGGGATCTGAATGTCAGTCATGAAGAGATCGATGTGAGTCAACCAGAGTTTTTCAGTACAGCAAAACTCAATGGTTATGTTCCTCCAAATAAAGAGGATTATGGGCAACCTGGATTTACCTTGGCTGAAAGAGCACGATTTGGTACCATCTTAAGAGAGGGGAAGCTGGTAGATGCCTACAGATTTCTGCACAAGGATAAGGACATGGAGCAGGGCTTCTCATGGTCTGGAAACCCAATAGGGAGGTACCGCGGAAAACGGATGAGAATAGACTATTTCATAGTTTCAGAAAAAATTAAAGAAAAGATTGCTGCATGTGAAATGCATGGAAAAGGGATAGAGTTACAAGGTTTCTATGGAAGTGATCATTGTCCAGTTACTTTGGAGCTCTCTCCTAGTTCCAACCCTCAAAATGAGGATCCAATATAA 1104 0.3967 MKRFFKVIEKDSEKCSKKPKENENEEEKKQDENEEEATKKEPLKFMTWNANSLLLRVKNNWSEFSNFITTFDPDVIAIQEVRMPAASSSSSNSKSAPKNQAEVKDDTNAAREEKRILMRALSNPPFGNYHVWWSLAESKYAGTALFVKKCFKPKSVVFNLDKIASKHEPDGRVILVEFETLRLLNTYVPNNGWKEEPNSFQRRRKWDKRILEFVNQNSDKPLIWCGDLNVSHEEIDVSQPEFFSTAKLNGYVPPNKEDYGQPGFTLAERARFGTILREGKLVDAYRFLHKDKDMEQGFSWSGNPIGRYRGKRMRIDYFIVSEKIKEKIAACEMHGKGIELQGFYGSDHCPVTLELSPSSNPQNEDPI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2385 367 MobiDBLite consensus disorder prediction 1 40 - -
Mtr3g2385 367 Gene3D Endonuclease/exonuclease/phosphatase 6 357 IPR036691 -
Mtr3g2385 367 Coils Coil 20 41 - -
Mtr3g2385 367 TIGRFAM xth: exodeoxyribonuclease III (xth) 43 355 IPR004808 GO:0004518|GO:0006281
Mtr3g2385 367 ProSiteProfiles AP endonucleases family 1 profile. 43 357 IPR004808 GO:0004518|GO:0006281
Mtr3g2385 367 PANTHER AP ENDONUCLEASE 30 358 IPR004808 GO:0004518|GO:0006281
Mtr3g2385 367 MobiDBLite consensus disorder prediction 86 109 - -
Mtr3g2385 367 SUPERFAMILY DNase I-like 43 355 IPR036691 -
Mtr3g2385 367 CDD Ape1-like_AP-endo 43 355 - -
Mtr3g2385 367 Pfam Endonuclease/Exonuclease/phosphatase family 46 348 IPR005135 GO:0003824
Mtr3g2385 367 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 30 358 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2385 - - gmx:100817167 610.912