Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2373 ATGGCACCAACTGTTCCCATAGATTTTGCTGGACAAAAGGAATCCAGAAAGTACTCTCAATCACAAATTATGGGGAAATCGAGAAAATATTCCAAAGGTTATGCTACTGGTTTTGTTCCTGAGTTTCGTCATGTGGTAGAGACTATGGGTGAGTCGGATGGGTTGGGTAGCTCGGGAAGGATTGACATGGAGCCGACTGCATCGGCGGATTCCTATGCACCGAACAGGAAACAACTTGGGTTGAAAGGTGATGACGGTTATGGTAGTTTTGACATTCCGTTTCAACTATACTCATTGTCTAAAATGTCGGCTATGGAGAGAAAGAATTTGAAATCGAGGTTGATTTGGGAACTTGAACAAGTGAGAAAACTTCAGAAGAAAATTGACAGTATGAATTCGAACATTGTTGGATTATCTCCGTCGAGTGACATAAGGAGCTGCAGTGTGGGACAGAAAAGGCCTCAGCTGGAGAGCCAACACAGTATACTGCAAGCATCGGTGCCACATGGTAAGAAAAGACCCCTGCCAGGGCGTAGTGGTCCCAAGACAAAAAAAAGTATGTCTGGACGTTTTGAATATCCAAAAACTGCTGCACCAATGGCTTCATATGCTACATTAATGAAACAGTGTGAGAACTTACTTAACCGTTTGATGTCTCATCAATTTGGTTGGGTTTTTAATGAACCAGTCGATGTTGTTAAATTGAACATTCCGGATTATTTCAATGTCATCAAACATCCAATGGATTTGGGTACTGTGAAGAGTAGGATAACATCTGGTAAATATTCAAATCCCATGGATTTTGCTGATGATGTGAGGCTGACTTTCAAAAACGCAATGACTTATAATCCACCTGGCAATGATGTGCACGGCATAGCATTGGCACTTAGTAAAGCCTTTGAAAAAGGATGGAAGTCCATCGAGAAGAAAATTCCTGTCATTGATCATCGTGTCCCATCTGAGCCTTCAAACCCTACTTATGTAGAAACTGTAATTTCTGACCCAATTCCCCCCACAAAAAAGAAGAAAATGACACCAAACGACACTTTTACCAAGCCAGAACCTGCTGAAAGAATTATGACTGACATGGAGAAGCAGAAATTGAGTCAACAGTTGGAGGATATGCTTGGAGACTTGCCTGATTCCATTCTGGATTTCTTGAAAGAGCAAAGTCGCATCGCAGGAGGGCAAACAAACGATGATGAAATTGAGGTTGATATTGATGCTCTTAGTGATGATACCCTGTTCAAATTACGTAAGCTTCTTGATGATTATTTGCTGGAGAAGCAACAATTTCAGCCAAAAGCTGGACAGTGTGAAACAGAGCTTCTTAATGAATCAGGGTTTAGCAATTCATCAATGCAACCTTCTAAAGGCAATGAACTGGTTGAGGAGGACGTGGACATCGTTGGTGGAAACGATCCGCCTAATTCAAATTATCCTCCACTAGAAATCGAAAAAGATGGAGTCAACAGAAACAGTAAATGCAGTAGTTCAAGCAGCTCTAGTAGTGAATCTGGCTCATCATCCAGTGGTTCGTATTCAGATTCAAGTAGTTCATCTGGTAGTGAGTTAGATACTGCTAAAGCGTCAGAACCTCTTAGTTCTAAGGAAAATGTGGGACCTGGCTTGACTTACGATCAAAACAGGGGGGATCCTAGTAATCCTGAAACTGGAAATGATTCAACTAACCTGGGTATCCAGGCTGACCAGAGTTTGCAGACTAAGCCAGATACTATTGAATCAGAGAGCCACCTAGATGGGGAGGGTGTTGCGTCTAAGAGGCAAGTCTCTCCTGAAAAGCTCTACCGTCAAGCTTTACTAAGGAGCCGGTTTGCTGACACCATACTGAAAGCTCAAGAGAAAGCCCTTGAAAAGGATGAAAAACGTGACCCTGAAAAGCTTAGGATTGAGCGAGAAGAACTTGAGAGGAGGCAGAAGGAAGAGAAAGCTCGATTGCAAGCAGAGGCAAAAGCTGCAGAAGAGGCCCGGAGGAAAGCTGAAGCAGAAGCTGCAGCTGAAGCCAAAAGGAAGAGGGAGCTGGAGAGAGAAGCAGCCCGGCAGGCTTTGCAAAATATGGAGAAAACCGTTGAAATCAACGAGAGCTGTCAATTTTTGGAAGATCTAGAAATGTTGAGTGCTGTACATGATGAAAAGACACCAAGTTTCAAAGAGGAGGCAAGCCCAGATGATCATCAAAATGGATTTGGTGGGATCAAGCTGCAGGGAAATCCCTTAGAGCAGTTAGGATTGTACATGAAGGTTGATGACGAGGATGAGGAGGAGGAACTGCCTCAGAGTGCTGCAGAGCCATCAAAAGATGTAGAAGAAGGAGAAATTGATTGA 2346 0.4314 MAPTVPIDFAGQKESRKYSQSQIMGKSRKYSKGYATGFVPEFRHVVETMGESDGLGSSGRIDMEPTASADSYAPNRKQLGLKGDDGYGSFDIPFQLYSLSKMSAMERKNLKSRLIWELEQVRKLQKKIDSMNSNIVGLSPSSDIRSCSVGQKRPQLESQHSILQASVPHGKKRPLPGRSGPKTKKSMSGRFEYPKTAAPMASYATLMKQCENLLNRLMSHQFGWVFNEPVDVVKLNIPDYFNVIKHPMDLGTVKSRITSGKYSNPMDFADDVRLTFKNAMTYNPPGNDVHGIALALSKAFEKGWKSIEKKIPVIDHRVPSEPSNPTYVETVISDPIPPTKKKKMTPNDTFTKPEPAERIMTDMEKQKLSQQLEDMLGDLPDSILDFLKEQSRIAGGQTNDDEIEVDIDALSDDTLFKLRKLLDDYLLEKQQFQPKAGQCETELLNESGFSNSSMQPSKGNELVEEDVDIVGGNDPPNSNYPPLEIEKDGVNRNSKCSSSSSSSSESGSSSSGSYSDSSSSSGSELDTAKASEPLSSKENVGPGLTYDQNRGDPSNPETGNDSTNLGIQADQSLQTKPDTIESESHLDGEGVASKRQVSPEKLYRQALLRSRFADTILKAQEKALEKDEKRDPEKLRIEREELERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQNMEKTVEINESCQFLEDLEMLSAVHDEKTPSFKEEASPDDHQNGFGGIKLQGNPLEQLGLYMKVDDEDEEEELPQSAAEPSKDVEEGEID* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2373 781 SMART bromo_6 199 309 IPR001487 GO:0005515
Mtr3g2373 781 MobiDBLite consensus disorder prediction 467 599 - -
Mtr3g2373 781 MobiDBLite consensus disorder prediction 492 534 - -
Mtr3g2373 781 CDD Bromo_plant1 206 304 IPR037377 -
Mtr3g2373 781 MobiDBLite consensus disorder prediction 548 579 - -
Mtr3g2373 781 MobiDBLite consensus disorder prediction 716 781 - -
Mtr3g2373 781 MobiDBLite consensus disorder prediction 333 353 - -
Mtr3g2373 781 SUPERFAMILY Bromodomain 183 313 IPR036427 GO:0005515
Mtr3g2373 781 Pfam Bromodomain extra-terminal - transcription regulation 360 423 IPR027353 -
Mtr3g2373 781 Gene3D - 192 318 IPR036427 GO:0005515
Mtr3g2373 781 MobiDBLite consensus disorder prediction 146 189 - -
Mtr3g2373 781 Coils Coil 637 696 - -
Mtr3g2373 781 PANTHER TRANSCRIPTION FACTOR GTE10 25 766 - -
Mtr3g2373 781 Pfam Bromodomain 210 293 IPR001487 GO:0005515
Mtr3g2373 781 ProSiteProfiles Bromodomain profile. 218 290 IPR001487 GO:0005515
Mtr3g2373 781 PRINTS Bromodomain signature 221 234 IPR001487 GO:0005515
Mtr3g2373 781 PRINTS Bromodomain signature 237 253 IPR001487 GO:0005515
Mtr3g2373 781 PRINTS Bromodomain signature 253 271 IPR001487 GO:0005515
Mtr3g2373 781 PRINTS Bromodomain signature 271 290 IPR001487 GO:0005515
Mtr3g2373 781 MobiDBLite consensus disorder prediction 146 165 - -
Mtr3g2373 781 MobiDBLite consensus disorder prediction 622 685 - -
Mtr3g2373 781 PANTHER TRANSCRIPTION FACTOR GTE8 25 766 - -
Mtr3g2373 781 ProSiteProfiles NET domain profile. 350 433 IPR027353 -
Mtr3g2373 781 MobiDBLite consensus disorder prediction 716 731 - -
Mtr3g2373 781 Gene3D - 353 432 IPR038336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2373 Mtr-Chr3 37552770 37558161 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2373 - - gmx:100776368 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2373 3 37552770 37558161 Mtr3g2373 3 37552770 37558161 ECH