Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2360 ATGCTTGATACCACTGCTCTCGAATCGTTCCCATCTTTGATTTCACATGGAATCAACGTTGCTGGAGAAATCTCTGCACCCCCATCGTTCCAGCTTCCCAATTCCAACGATTTCGATGGGTTTGTTAAAGAAACTATTCAGATGGTGAAACCCGCGAAGGGTACTACAACTCTTGCTTTTATATTCAAGGAGGGTGTTATGGTAGCTGCTGATTCTCGTGCTAGTATGGGAGGATATATATCATCACAGTCTGTGAAGAAAATTATTGAAATTAATCCGTACATGCTTGGAACTATGGCTGGAGGTGCTGCTGATTGCCAATTTTGGCATAGGAATCTCGGCATCAAGTGTCGCTTGCATGAATTGGCAAATAAAAGAAGAATTTCAGTCACAGGAGCCTCTAAGTTACTTGCGAACATTTTATACTCTTACCGTGGAATGGGATTATCTGTTGGTACCATGATTGCTGGATGGGATGAGACGGGTCCTGGTCTATATTATGTTGATAGTGAAGGAGGAAGACTAAAAGGCAATAGATTCTCTGTAGGATCTGGTTCGCCATATGCTTATGGTGTACTGGACAGCGGGTACAAATATGACATGTCAGTTGAGGAAGCTTCGGAACTGGCTCGACGGGCAATTTATCATGCAACATTTCGTGATGGAGCCAGTGGTGGAGTTGCTAGCGTTTACTATGTGGGACCAACTGGATGGAAGAAATTGTCTGGTGATGATGTTGGTGAACTTCACTACCATTACAACCCAGTTACCCCAAGCACCGTGGAGCAAGAAATGGTTGAGGCAGCTGGACCCTGA 816 0.4436 MLDTTALESFPSLISHGINVAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELHYHYNPVTPSTVEQEMVEAAGP* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2360 271 ProSitePatterns Proteasome beta-type subunits signature. 58 105 IPR016050 GO:0005839|GO:0051603
Mtr3g2360 271 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 55 264 IPR029055 -
Mtr3g2360 271 PRINTS Proteasome component signature 62 77 IPR000243 GO:0004298|GO:0005839|GO:0051603
Mtr3g2360 271 PRINTS Proteasome component signature 183 194 IPR000243 GO:0004298|GO:0005839|GO:0051603
Mtr3g2360 271 PRINTS Proteasome component signature 194 205 IPR000243 GO:0004298|GO:0005839|GO:0051603
Mtr3g2360 271 PRINTS Proteasome component signature 219 230 IPR000243 GO:0004298|GO:0005839|GO:0051603
Mtr3g2360 271 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 29 268 - -
Mtr3g2360 271 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 46 253 IPR029055 -
Mtr3g2360 271 PANTHER PROTEASOME SUBUNIT BETA 29 268 - -
Mtr3g2360 271 CDD proteasome_beta_type_5 55 242 - -
Mtr3g2360 271 Pfam Proteasome subunit 53 233 IPR001353 GO:0005839|GO:0051603
Mtr3g2360 271 ProSiteProfiles Proteasome beta-type subunit profile. 54 233 IPR023333 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2360 K02737 - gmx:100779240 506.908