Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2352 ATGGCGCCGCACGATCTCCGCCGTCCATTCAAACGTCCCTTAATCTCCGATCAAGAGCGACGCAGACAACAATCTCTACTCCGTCAAGCACAGAATCGCCTCGACGCTCAACACCATGCTCGCTTCTTAGTTTCCACCGCATTCTCTCTCTCTTCTTCCCAAACTCCCGAACCTGAAACCGAACCTATCCACGAACCCGAATCACATCAGAATGACGAACTCGATGTTCTAGAAGCTTCGAAGCTGAAAGGCGCAGAAGCTCGAAAATGGTTCGCCAAACAACTCATGCATCCTGAATGGATGATCGATATCCCTGAAAATCTCACCAATGATTGGTTTGTTCTTGCAAGGCCTTCTGGAAAAAGGTGTTTTGTGGTTTCCAGTAACGGAACAACGATAAGCCGTTTGAGAAACGGTTCAATTCTTCATCGTTTTCCTTCTAAATTGCCAAACGGAGCAAGAACAAAGGATGTTAACTCCGGTTCTTCAAATTCTTACTCTATACTTGACTGCATTTTCCATGAACAGGATCAAACTTACTATGTTATTGATATGGTTTGTTGGCGTGGCTACTCCCTCTACGATTGTACTTCTGAGTTCAGGTTCTTTTGGGTGAACTCTAAGCTTGCTGAGACCGGTGCCTTTGACCCTCCTTCATATTATCATAAGTATAGCTTCAGTTTAGTTCCGGTGTACGGTTGTGATCAGAGTGGTTTGTGTTCAGCTTATTCAGCACCTGTGCCTTATGTCAAAGACGGTCTTCTGTTCTATAACAAGCATGCACATTACCAGGCTGGGATTACGCCATTAGCATTAGTTTGGAAGGATGAGAACTGCAGCCAATATGTTATGGACACAGACAGTAAAGGACAGGTTCCAAACCAACAACAGGTGGTTTTGGAGCTTCAAGAAGATGGAAAACTGACTACATGCGATGATCCTCCTGTGGTATTTGGCTGTTTAGATGGAAGCTTCATCCAGCAGTCAGATTTGCATTCAGGGTATCTTCTACGGTTTGCAATTGGAGAAGAAGGGTTGGTTTTGGTGGGTGGGAAACTTGAGAAAGCTGATCTACAATATCTTGGCAAGGCCAATCGAGCTCGTGCCTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAATATAGTGTTCGACACTCCCCCCTCAAACTTGATGATCTGTTGGGGTCTGTCAGCTCACCAGTAGATCAAGAAAGTAAAGCATGCGACATTGAGATGGATGGTTGA 1245 0.449 MAPHDLRRPFKRPLISDQERRRQQSLLRQAQNRLDAQHHARFLVSTAFSLSSSQTPEPETEPIHEPESHQNDELDVLEASKLKGAEARKWFAKQLMHPEWMIDIPENLTNDWFVLARPSGKRCFVVSSNGTTISRLRNGSILHRFPSKLPNGARTKDVNSGSSNSYSILDCIFHEQDQTYYVIDMVCWRGYSLYDCTSEFRFFWVNSKLAETGAFDPPSYYHKYSFSLVPVYGCDQSGLCSAYSAPVPYVKDGLLFYNKHAHYQAGITPLALVWKDENCSQYVMDTDSKGQVPNQQQVVLELQEDGKLTTCDDPPVVFGCLDGSFIQQSDLHSGYLLRFAIGEEGLVLVGGKLEKADLQYLGKANRARASADSFSKVMFQYSVRHSPLKLDDLLGSVSSPVDQESKACDIEMDG* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2352 414 MobiDBLite consensus disorder prediction 49 72 - -
Mtr3g2352 414 Gene3D DNA ligase/mRNA capping enzyme 2 302 - -
Mtr3g2352 414 CDD Snurportin-1_C 90 277 - -
Mtr3g2352 414 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 91 275 - -
Mtr3g2352 414 MobiDBLite consensus disorder prediction 1 23 - -
Mtr3g2352 414 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 413 IPR017336 GO:0005634|GO:0005737|GO:0061015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2352 K13151 - gmx:100801927 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2352 3 37364116 37369397 Mtr3g2352 3 37364116 37369397 ECH