Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2346 ATGTCTGGGCCATTGTACAGAGGTGTGTCTGGGATTCGGATCCCGGATAATAGTATGGATTCGTGGGATTCACAATCGAAAGATAAAACGGAAAAAGATGGTTTGGATAGAAGAGGTTCTTCTGATCAGAGTCCTTTACATTTGTCATCGCCCTTTAGGTTGCTTTTTGCAGATAATAGTTCACATTCTAAATTTGGTGTCACCGAGAATGGTTTCTCACCTGATCCGTTTATTCTTGGCACTCCTAGAAGTCGGCATAAGTTGATTCTTCTTTTCATGAAGTTTAGTATAGTGTTGATAGTTATTCTTGCTCTTGCTGGGTCGTTTTGGTGGACGGTCTCGATTTCAACTACATCAAGAGGTCAAATTTACCATGGTTATAGAAGACTTCAAGAGAAACTTGTATCGGACCTTTTGGATATCGGAGAGATTTCTTATGCTCCTTCAAGACTGAAAGAATTGGAATTCTGTTCTCAGGAGTTTGAAAACTATGTTCCTTGTTTTAATGTTTCTGATAATCTAGCTCAGGGTTACTCCGATGGCAGTGAGTTTGATCGGCAATGTGGCCGCGAGCTTAGGCAAGATTGTTTACTTCTCTCGCCGATGAATTACAAAATTCCTCTTCGGTGGCCTACTGGAAGGGATGTTATCTGGATTTCTAATGTTAAAATCACTGCACAGGAAGTTCTTTCTTCTGGAAGCTTGACCAAGAGGATGATGATGCTCGATGAAGAGCAAATTTCCTTTCGTTCTGCCTCCCTTATGTTTGATGGTGTTGAAGACTACTCACACCAAATCGCAGAAATGATTGGACTTAGAAATGAATCTAACTTCATACAAGCAGGGATTAGAACCATACTGGACATTGGTTGTGGCTATGGTAGCTTTGGAGCGCACCTCTTTCACAGTCAACTTTTAACTATGTGCATTGCAAATTATGAGCCTTCCGGAAGTCAAGTTCAACTTACACTTGAGAGGGGTCTTCCTGCTATGGTTGCTTCTTTCGCTACAAAACAGTTGCCTTATGCATCTCTCTCCTTTGATATGCTGCATTGTGCTAGATGTGGCATAGATTGGGATCAGAAAGATGGAATTCTCTTGATTGAAGCTGATAGACTTTTAAAACCTGGGGGCTACTTTGTCTGGACTTCGCCGCTTACAAATGCTCGCAACAAAGACAGTCAGAAAAGGTGGAAGTTGATACACGATTTTGCAGAAAACCTTTGCTGGGATATGCTATCACAGCAAGATGAAACTGTTGTATGGAAGAAAATTAGTAAAAGAAAATGCTATAGTTCAAGAAAGAACAGCTCTCCTCCTCCTCCTTTATGCAGTAGAGGCTATGATGTGGAGTCTCCATACTATCGAGAACTGCAAAATTGCATCGGAGGAACACATAGCAGCCGTTGGATTTCTATTGAAGAGAGAGCAACCTGGCCTTCCAGGGATTACCCGAACAAGAACGAGCTTGAAATATATGGATTGCAACCCGATGAATTTGCCGAGGACGCCGAAAGCTGGAAGGCAGCAGTACAAAATTATTGGTCTCTTTTGTCACCTTTGATATTTTCCGATCATCCAAAGAGACCTGGTGATGAGGACCCTCCACCACCTTTCAACATGCTAAGAAACGTGCTAGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCCTTGTTGCAGTCTAAAAAATCCGTGTGGGTCATGAATGTGGTGCCGACGAGTGGACTCAACTATCTTCCTATGATCCAGGACCGCGGTTATGTTGGTGTTTTGCATGATTGGTGTGAAGCCTTTCCAACATACCCTAGAACCTATGACTTGGTACACGCAGCAGGGTTTTTATCCCTTCAAACTTCTCAGCAGTACAGATGTACCATGCTTGATATATTCATTGAAATTGACAGGTTACTTCGCCCAGAGGGTTGGATTATAATTCGCGACACGGTTCCTTTAATAGAATCAGCGAGAACTTTGACAACTCGGCTAAAGTGGGACGCAAGAGTCATAGAAATCGAAAGTGATAGTGATCAGAGACTCCTGATCTGCCAGAAGCCTTTCTTTAAGAGACAAGCAAATTAA 2082 0.4217 MSGPLYRGVSGIRIPDNSMDSWDSQSKDKTEKDGLDRRGSSDQSPLHLSSPFRLLFADNSSHSKFGVTENGFSPDPFILGTPRSRHKLILLFMKFSIVLIVILALAGSFWWTVSISTTSRGQIYHGYRRLQEKLVSDLLDIGEISYAPSRLKELEFCSQEFENYVPCFNVSDNLAQGYSDGSEFDRQCGRELRQDCLLLSPMNYKIPLRWPTGRDVIWISNVKITAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQAGIRTILDIGCGYGSFGAHLFHSQLLTMCIANYEPSGSQVQLTLERGLPAMVASFATKQLPYASLSFDMLHCARCGIDWDQKDGILLIEADRLLKPGGYFVWTSPLTNARNKDSQKRWKLIHDFAENLCWDMLSQQDETVVWKKISKRKCYSSRKNSSPPPPLCSRGYDVESPYYRELQNCIGGTHSSRWISIEERATWPSRDYPNKNELEIYGLQPDEFAEDAESWKAAVQNYWSLLSPLIFSDHPKRPGDEDPPPPFNMLRNVLDMNAHFGGFNSALLQSKKSVWVMNVVPTSGLNYLPMIQDRGYVGVLHDWCEAFPTYPRTYDLVHAAGFLSLQTSQQYRCTMLDIFIEIDRLLRPEGWIIIRDTVPLIESARTLTTRLKWDARVIEIESDSDQRLLICQKPFFKRQAN* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2346 693 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 16 691 IPR004159 GO:0008168
Mtr3g2346 693 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 16 691 - -
Mtr3g2346 693 MobiDBLite consensus disorder prediction 1 46 - -
Mtr3g2346 693 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 281 432 IPR029063 -
Mtr3g2346 693 Gene3D Vaccinia Virus protein VP39 256 430 IPR029063 -
Mtr3g2346 693 MobiDBLite consensus disorder prediction 22 40 - -
Mtr3g2346 693 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 163 685 IPR004159 GO:0008168
Mtr3g2346 693 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 504 652 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2346 Mtr-Chr3 37260458 37267402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2346 K23870 - gmx:100812530 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2346 3 37260458 37267402 Mtr3g2346 3 37260458 37267402 ECH