Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2341 ATGGCGGAAACCATCAACGAAACCGCAACGGTTACGGCGGAAACCACCAAACAAACCACCGTGACTCTTCCGGTTCTTGATCTCCGTCTTTTTTCACAACTCGAGCTCAACAATATCGCTGACAAAAACTCCACCGCTCGTAACCGTCGTTTCGATGACGATTCCGTTATCCCTAAAATTGACCGTTCCGTTTTTAATGAGAGCGCCGGTAGCCGGAAACAGACGTATTCTCGTCTTCGTCTCCGGAAACCGAACTCTTCTGCTCCGGTTCCTGCTCCCGTTGTTCCTGTTTCTTCCAGTTCTCGCATTGCTGATGATGAAGAGAATTCAAGGATTATCGATCTTCTCCAGGGTTTATTTGGTGTTGAAGCGCTTCGTGGCGGGAATGATGACCGTGCTGTTCCGCTTCAGATTGAATTCAGGCCTTTATCCGTTCAGAACGGTTCAATTGATGGTGTGGAGTCCAGTCAGAGGAAGCGGAAGCGTGGGCGGCCTAGTAGGGATGTGACTCCGGTCCCGGGGAGACTTTTAGCCATCTGTGAGGCGATGGAAACGGATACTGAGAAAAAGGTGGAAGCGGATATGGAAGTGGTTACTGCTGAGGAGAAGAATGAGTCTGTTTTGGATGATGCGGGGGATCCGTTTATGGAGGAGTTGATAAAGAGGTCACAAGGGATGAATACTGAGGCGGAATTGAAGGTGTTTTTGGAGAGTTTGGGTGGAGTTTGGGCGAGTGATAGGAAGAAGAGGAGGATTGTTGATGCCAATGCTGTTTGTGATTTGTTGCCAACTGGATGGAAGCTTGTGCTTATTGTGCAGAGGAGAGGAAAGCATAATTCTGTGGTTTGTCGCCGTTACACAAGCCCTGATGGACGCCAGTTTGACTCATACAAGGATGTTTCTTCATACTTAGTTTCTTTGTCCGGTGTTCAAGACATAGGCCAGTTACAATCTTGTTATACTGATGGTAGTCAGCAGCTCTCCAGTAATATCAACGTGGCATCTGCAAATAATGTTGCTCACGTTCCTACAGGTGGCATTAAGATTGACGGCAATGCAAGTTCTCATCATGAGAAGCAGGAAACCATATCATCATCAATGGGAACTGGAAATCTAAACATTTCTGATGGGAATTTGAATGGTGACCTGGCTATGTATTGTGAACAAAGCCATATTACTAGCGAAGCCTTTAGAGTCCCTGAGCATTCAACTGATGTTGGGCTACCACTGAAGGACACCAAGAATGGTGCAAATTCAGTTCCGGGATGTTTTCTTTCGGAGGACAGAGTTTATAATCTGAATGTTGGTCAAATCCCTTCAGGTGGCACGAAGATTGATGCCCATAGTTCTCATCAGGTGAAGCAGGCCACCATGTCGCCATCAATTGGAACTAGAAAGCTGAACGCTTCTAACAGGAATATCAGTAGTAACCTGAATTTTGATCGGAAATTGGTGTTAGCTCTTAAGGCTAGTGATACTGCACGAAATCCAGGCATTCTTTTGGATTTCACAGCTCCTATCTCCAATAGTGGCCGTGGCATTGATCGCTGTTCTGATGAAAGAAATGCTGTGACATGCATAAAAGGCAGTGTTAGTAATTTTGATAGTCAGGATAAAAGTACAGGATACTGTGAAACTGTTCCCTATGGAAATGAGCAGGTACATGTTGGTGACAATGGGCTTGGGCCTTCCTCCACATTAGTGGAAAACCACATTCAGAAAATAGGTTCTGAAAGCAGCATGCTGGTTCCAAATTCTGAAGAGAAAATGTTTGCTGGTAGCAATCTAGAGGATATACATCTTCTTAGCTCTGTGGTGGGCATGGAGCAAAATGATGGAAAGCTAGTTGAGAACGACAATCAACAAATTATTTCTAGTAGAAATCAGTCAGGAATTGAAGATATTTCTACCAATGGTGAACTTCAGTTTAGTTCTGAAGGCACTCTTGCCCCATCCCAGAATGAACATCACCATACATCTATACACAGTATGGATGTAGCACAAACTTCTGTGCTGAAGGACTCTGCTGAGGGACATTTTTTCTATAATGATTTATCTAGTTCATCCATTGATGAGAGAACATGGGATCCCAATGGATACATTAATAATATTTCTTTTGGTGCTTGGCCACAAGATGCATCTGTGTTTGGTGTAGTTGATTTTACTACCGATCTTTATGCAGCTAACAATTTTAATCATGTTCCTCCAACAGATGAAGTTGCGAGAAGCTGTGTACAGAAAAGCAGTTCCATGAATGGCCAAATTTTCACAGCAGACAATCTGTTGCATAGAAACTCTGAGAGTAATTTATTTACTGTTGCCGGGAATCAGCACCCTGCTGCTTTTCATGATAATATGAATAACATATCAGCTGGAACCTTCAGTGCACTCAAATATGTTGATGCTGGTTGCATGAAACCTCAGCTGGGAATTGTTTCATGCAGTAATGTTATTGCACCAGATGCATATGCATCTCCTACAGTCATGCAGGGGATATCAGAATCTGTTCCTCCTGGTGGAAGTATATTAAACCAGTTTGGCAAGCAAAATGATGATGGTGTCAGTAAAGGAAACAAATCTTGCTTATCAGAGGTGGCTCAAAGTGAAGCTGAACTATTCCAAACCGACTCCATGGGTTTTCCTAAATTTCGGTAG 2655 0.4365 MAETINETATVTAETTKQTTVTLPVLDLRLFSQLELNNIADKNSTARNRRFDDDSVIPKIDRSVFNESAGSRKQTYSRLRLRKPNSSAPVPAPVVPVSSSSRIADDEENSRIIDLLQGLFGVEALRGGNDDRAVPLQIEFRPLSVQNGSIDGVESSQRKRKRGRPSRDVTPVPGRLLAICEAMETDTEKKVEADMEVVTAEEKNESVLDDAGDPFMEELIKRSQGMNTEAELKVFLESLGGVWASDRKKRRIVDANAVCDLLPTGWKLVLIVQRRGKHNSVVCRRYTSPDGRQFDSYKDVSSYLVSLSGVQDIGQLQSCYTDGSQQLSSNINVASANNVAHVPTGGIKIDGNASSHHEKQETISSSMGTGNLNISDGNLNGDLAMYCEQSHITSEAFRVPEHSTDVGLPLKDTKNGANSVPGCFLSEDRVYNLNVGQIPSGGTKIDAHSSHQVKQATMSPSIGTRKLNASNRNISSNLNFDRKLVLALKASDTARNPGILLDFTAPISNSGRGIDRCSDERNAVTCIKGSVSNFDSQDKSTGYCETVPYGNEQVHVGDNGLGPSSTLVENHIQKIGSESSMLVPNSEEKMFAGSNLEDIHLLSSVVGMEQNDGKLVENDNQQIISSRNQSGIEDISTNGELQFSSEGTLAPSQNEHHHTSIHSMDVAQTSVLKDSAEGHFFYNDLSSSSIDERTWDPNGYINNISFGAWPQDASVFGVVDFTTDLYAANNFNHVPPTDEVARSCVQKSSSMNGQIFTADNLLHRNSESNLFTVAGNQHPAAFHDNMNNISAGTFSALKYVDAGCMKPQLGIVSCSNVIAPDAYASPTVMQGISESVPPGGSILNQFGKQNDDGVSKGNKSCLSEVAQSEAELFQTDSMGFPKFR* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2341 884 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 252 325 IPR001739 GO:0003677
Mtr3g2341 884 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 6 864 - -
Mtr3g2341 884 SUPERFAMILY DNA-binding domain 255 306 IPR016177 GO:0003677
Mtr3g2341 884 Pfam Methyl-CpG binding domain 257 305 IPR001739 GO:0003677
Mtr3g2341 884 MobiDBLite consensus disorder prediction 148 170 - -
Mtr3g2341 884 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 6 864 IPR037472 -
Mtr3g2341 884 MobiDBLite consensus disorder prediction 83 102 - -
Mtr3g2341 884 Gene3D - 254 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2341 Mtr-Chr3 37216025 37223330 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2341 - - mtr:MTR_3g074640 1697.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2341 3 37216025 37223330 Mtr3g2341 3 37216025 37223330 ECH