Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2334 ATGACGACAATGCTAGAAAGCAACATTTGCAACCACCATTCACATTCTCTTCCCATTTTCTTCAACCCCAATTCCAATCCTATATCCGGTGGAATCTTTCTCGAACCCACACTTCCCGATTCTTTTCTTCGTTTCATTTCGTTACCAATTCCTTCAACTGCTTCCTCCGAATCAAATCTTCACCGCCGACAACGGCGAAGGTTTCCACCGCCGGTTGGTTGTTTTTTGTCGGTTAGCTTGCCGAGTAGTAATAATCTTCCCGCCGATTCAAAACCGTTTGTATTGCATAAGGATAAAAAGGTTAGGGCTAGAGAACGCGCTGCTGTTAATAATACTACGAAGCATCTTTGGTCTGGTGCTATATCTGCAATGGTTTCTAGAACTTGTGTTGCACCACTTGAAAGACTTAAGCTGGAATATATTGTTCGTGGTGAGAAGAGGAATATCTTTGAGCTTATAAAGTCAATTGCTACAACTCAAGGGTTGAGAGGTTTTTGGAAGGGGAACCTTCTAAATATTCTGCGAACGGCTCCGTTCAAAGCTGTTAATTTTAGTGCTTACGATACGTATAGAAAACAACTACTTAGATTCTCTGGAAACGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGGTTACCGCTACTATTATCTGCCTTCCACTTGATACTATTCGGACCAAGATAGTGGCACCTGGTGGAGAAACTTTGGGTGGTGTAATTGGTGCTTTCCAATACATGATTCAAACAGAAGGCATCTTTTCTCTATACAAGGGTTTAGTACCATCACTTATAAGCATGGCTCCTTCCAGTGCAGTCTTTTATGGTGTATACGATATGCTAAAATCATCGTATCTGCATTCACCCGAAGGAAAGCAAAGAATCAAGAATATGCATAAACATGGGCAGGAACTGAGTGCCTTTGATCAGCTTGAGTTGGGGCCGGTAAGGACATTGTTGCATGGGGCTATTGCTGGTGCATGTGCTGAAGCTGCTACATACCCATTTGAAGTGGTGAGGAGGCAGCTTCAATTGCAAGTCCAGTCTACTAAATTAAGTTCTTTAGCAACTTTTGTCAAAATTGTGGAACAAGGAGGCATTTCAGCCCTCTATGCAGGACTTATTCCCAGCTTATTACAGGTACTTCCTTCAGCATCAATTAGTTACTTTGTGTATGAGTTTATGAAGATTGTTCTCAAAGTAGAGTAG 1221 0.4201 MTTMLESNICNHHSHSLPIFFNPNSNPISGGIFLEPTLPDSFLRFISLPIPSTASSESNLHRRQRRRFPPPVGCFLSVSLPSSNNLPADSKPFVLHKDKKVRARERAAVNNTTKHLWSGAISAMVSRTCVAPLERLKLEYIVRGEKRNIFELIKSIATTQGLRGFWKGNLLNILRTAPFKAVNFSAYDTYRKQLLRFSGNEETTNFERFIAGAAAGVTATIICLPLDTIRTKIVAPGGETLGGVIGAFQYMIQTEGIFSLYKGLVPSLISMAPSSAVFYGVYDMLKSSYLHSPEGKQRIKNMHKHGQELSAFDQLELGPVRTLLHGAIAGACAEAATYPFEVVRRQLQLQVQSTKLSSLATFVKIVEQGGISALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVE* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2334 406 SUPERFAMILY Mitochondrial carrier 110 399 IPR023395 -
Mtr3g2334 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 288 IPR018108 -
Mtr3g2334 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 317 402 IPR018108 -
Mtr3g2334 406 PRINTS Mitochondrial carrier protein signature 115 128 IPR002067 GO:0055085
Mtr3g2334 406 PRINTS Mitochondrial carrier protein signature 128 142 IPR002067 GO:0055085
Mtr3g2334 406 PRINTS Mitochondrial carrier protein signature 168 188 IPR002067 GO:0055085
Mtr3g2334 406 PRINTS Mitochondrial carrier protein signature 218 236 IPR002067 GO:0055085
Mtr3g2334 406 PRINTS Mitochondrial carrier protein signature 261 279 IPR002067 GO:0055085
Mtr3g2334 406 PRINTS Mitochondrial carrier protein signature 326 348 IPR002067 GO:0055085
Mtr3g2334 406 Pfam Mitochondrial carrier protein 203 290 IPR018108 -
Mtr3g2334 406 Pfam Mitochondrial carrier protein 112 195 IPR018108 -
Mtr3g2334 406 Pfam Mitochondrial carrier protein 317 403 IPR018108 -
Mtr3g2334 406 Gene3D Mitochondrial carrier domain 106 405 IPR023395 -
Mtr3g2334 406 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 25 406 - -
Mtr3g2334 406 PANTHER SOLUTE CARRIER FAMILY 25 25 406 - -
Mtr3g2334 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 193 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2334 Mtr-Chr3 37152507 37159176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2334 188 400 Organic Solute Cotransporters AT5G64970 19.718 6.08e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2334 - - gmx:100816623 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2334 3 37152507 37159176 Mtr3g2334 3 37152507 37159176 ECH