Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2322 ATGGAGGAGCGGGCCTCACCGCCACCACCTCCTCCTCCGCATGATTCTAATTCTAAACCTCAATTACCTAACATTAACCGCAACACCTTCGTTGTCCAAGTCCCTAAGGACCAAATCTACCGCGTTCCACCACCTGAAAATGCGCGCCTTGCTGAGCAACGTCGAAGCTCTCCACCAAAGGAGAAAAATCGGATGTGTTGTTGGTGTTTTGTGTTGATTTTCTTCATAGCGGTTGTAATATTGATTGGAGTTGTTTTGGGTAGCCTTTTTTCAATGGTTCGTACGCCAAAGGACCCAAAATTTTCTATCCAACGGTTTCTTTTACATACCAAACCCCACACACAATACAAAATCACATTACAAGCCCAAAATCCAAATTCAAATGTGGACATTTTGTATAAAGGAGGTGATATTTCCCTCTCTTTAAAAAGACAAAAAATTGCTTCAGGTGCTTATCCAACTTTCTCTCTATCCAATCAAAATTCAACCATGTTTGACGTAACTTTAAAAGGTTCAACAACCAAATTGCCTAAGGAGGTGGAAGAAAGCGTGAAGAATGAACAAAGGAAAGTGCAAATTACATTTGCCTTATTAATTCATCTCCAAGCCCAAATGAAAATGGGATTGTTGCATAGTGGATCAATGAAATACGAAGTTTCATGCCAAGTAACGGTGGATACATTGGCAAGAATCAATCGTCAAGTAACGGTGGATACAATGGCAAAAAACAATCGTGTAGTTTCTCAACAATGTCAAACTAAACGACACTAG 771 0.4021 MEERASPPPPPPPHDSNSKPQLPNINRNTFVVQVPKDQIYRVPPPENARLAEQRRSSPPKEKNRMCCWCFVLIFFIAVVILIGVVLGSLFSMVRTPKDPKFSIQRFLLHTKPHTQYKITLQAQNPNSNVDILYKGGDISLSLKRQKIASGAYPTFSLSNQNSTMFDVTLKGSTTKLPKEVEESVKNEQRKVQITFALLIHLQAQMKMGLLHSGSMKYEVSCQVTVDTLARINRQVTVDTMAKNNRVVSQQCQTKRH* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2322 256 MobiDBLite consensus disorder prediction 1 27 - -
Mtr3g2322 256 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 11 254 - -
Mtr3g2322 256 Pfam Late embryogenesis abundant protein 119 221 IPR004864 -
Mtr3g2322 256 SUPERFAMILY LEA14-like 84 203 - -
Mtr3g2322 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 254 - -
Mtr3g2322 256 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2322 Mtr-Chr3 36973279 36974049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2322 28 228 EF-hand Containing Proteins AT5G21130 30.841 3.81e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2322 - - aprc:113853148 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2322 3 36973279 36974049 Mtr3g2322 3 36973279 36974049 ECH