Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2313 ATGATGTTAGGGAAGAGACCTCGTCCACCAATGAAAAGAACAACAAGTATGTCAGAAATAACCTTCGATCTGAACACAGTAACAACAGAAGAAGATCCCAATAACAACAACAACCTTTTCAACCGTCATGGACCTGGTGTTGGTCCGTACGGTCCATATCCACCAACTTCTCCTGGAATCAACGGTTCAGATCAGAGCAGGGTTATGTCCATGGTATCACCTAGAAACCTTAGAAGAAATTCAGCTGATATGACTCACAACCCTGATTTCTTACGCTCTTGCTTTCTCTGTAAACGTCGTTTGGTACCTGGTCGTGACATCTACATGTACAAAGGAGATAGTGCTTTCTGCAGTCTAGAGTGTCGTCAACAGCAGATGAATCAAGATGAGAAGAAAGATAAGTGTTCTGTGGTATCAAAGAAACAAGTTGTGGTTGCAGCTGGGTCTAAAGTGGTTGCCACAAATTTGTAG 471 0.4268 MMLGKRPRPPMKRTTSMSEITFDLNTVTTEEDPNNNNNLFNRHGPGVGPYGPYPPTSPGINGSDQSRVMSMVSPRNLRRNSADMTHNPDFLRSCFLCKRRLVPGRDIYMYKGDSAFCSLECRQQQMNQDEKKDKCSVVSKKQVVVAAGSKVVATNL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2313 156 Pfam zinc-finger of the FCS-type, C2-C2 84 132 IPR007650 -
Mtr3g2313 156 ProSiteProfiles Zinc finger FLZ-type profile. 89 133 IPR007650 -
Mtr3g2313 156 PANTHER - 1 149 - -
Mtr3g2313 156 PANTHER FCS-LIKE ZINC FINGER 5 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2313 Mtr-Chr3 36872710 36873936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2313 - - aprc:113852663 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2313 3 36872710 36873936 Mtr3g2313 3 36872710 36873936 ECH