Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2302 ATGGGTTCGTTTTTCAGCGTGGCGAAGAATACTAATTCGGATCAAAGTGAGTGGGATGGAGTCTCTTTGAATGATACATGTAAGAGGCAAAGAATGTCGCCTACTGTTGATGAAGAGAATCCAAGACTGTTTCCAAATCTCCCTGATGAGGTTTCGATTCAGATTATTGCTAGACTTCCGAGAATTTGTTACTTCAATGTGAGGATGGTGTCGAGGAAGTGGAAGTCGACTGTCACGAGTTCGGAACTATATAAAGTAAGAAAAGAACTCGGGACAACGGAAGAGTGGCTGTATTTGTTGGTTAAGTTAGGAGAAAATAAGCTTCTGTGGCATGCCGTAGATCCGAGGTCAAGGATATGGCAGAGATTGCCTACTATGCCTAATGTTGTTGATGAAGAAGAATCTAAAAAGGGTTCTTCTAGGCTTTGGATGTGGAATATGGTGGAAGGTATTAGAATTGCTGAAGTTATTAGAGGCTTTCTTGGAAAGAGGGATGCATTTGATGAAATGCCCTTTTGCGGTTGTGCTATTGGAGCTGTTGGTGGATGTCTCTATGTTCTAGGTGGATTCTCTAAAGCTTCGACTATGAGATGTGTCTGGAGATTCGACCCAATGCAGAATACGTGGAGCAAGGTGACTTCTATGTCTACTGGTCGGGCATACTGTAAGACAGGGATCTTAAATGACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCCAGCTGGATTGATACCTCTTCAATCTGCTGAAGTTTTTGATCCCTCGACAGGTACATGGTCGGACGTGCCTAGTATGCCATTCTCGAGAGCTCAGGTTCTCCCCAACGCTTTCTTGGCCGACATGTTAAAGCCGATTGCCACAGGGTTGACAGCATACATGGGAAGGTTATGTGTTCCACAAAGTTTATATTCATGGCCCTTTTTTGTTGATGTTGGAGGAGAAATCTATGATCCTGAAACAAACTCATGGATAGAAATGCCACTTGGAATGGGCGAAGGTTGGCCCGCACGGCAAGCAGGTACAAAATTGAGTGTCGTAGTGGATGGCGAATTATATGCTTTTGATCCTTCCAATACTATGGACAGTGGAAGGATCAAGGTATATGATCAAGGAGAAGATGCTTGGAAAGTTGTCATTGGAAAAGTCCCTATATATGGTTCAGATGATTCAGAATCTCCTTATCTACTTGCTGGTTTCCATGGAAAACTTCATGTCATCACAAAAGATGCTGATCATAACATTGCTGTTCTGCAGGCCGAGCTGCGCAGTAATTTGGATTCTTCACCATCATCACCCTCCTCAACACTGTCACAAAGTTCCTTACATGAAAATGCGGACCCGCCGGCCGAAACAGACGCAGTTGTTTGGAAGATAGTTGCTAGTAGGTGTTTGGGACAGGCTGAACTAGTTAGTTGCCAAGTAATTGATATGTAG 1437 0.4363 MGSFFSVAKNTNSDQSEWDGVSLNDTCKRQRMSPTVDEENPRLFPNLPDEVSIQIIARLPRICYFNVRMVSRKWKSTVTSSELYKVRKELGTTEEWLYLLVKLGENKLLWHAVDPRSRIWQRLPTMPNVVDEEESKKGSSRLWMWNMVEGIRIAEVIRGFLGKRDAFDEMPFCGCAIGAVGGCLYVLGGFSKASTMRCVWRFDPMQNTWSKVTSMSTGRAYCKTGILNDKLYVVGGVSQGPAGLIPLQSAEVFDPSTGTWSDVPSMPFSRAQVLPNAFLADMLKPIATGLTAYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPLGMGEGWPARQAGTKLSVVVDGELYAFDPSNTMDSGRIKVYDQGEDAWKVVIGKVPIYGSDDSESPYLLAGFHGKLHVITKDADHNIAVLQAELRSNLDSSPSSPSSTLSQSSLHENADPPAETDAVVWKIVASRCLGQAELVSCQVIDM* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2302 478 SMART kelc_smart 230 276 IPR006652 GO:0005515
Mtr3g2302 478 SMART kelc_smart 183 229 IPR006652 GO:0005515
Mtr3g2302 478 MobiDBLite consensus disorder prediction 425 448 - -
Mtr3g2302 478 ProSiteProfiles F-box domain profile. 41 87 IPR001810 GO:0005515
Mtr3g2302 478 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 5 477 - -
Mtr3g2302 478 MobiDBLite consensus disorder prediction 425 446 - -
Mtr3g2302 478 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 477 - -
Mtr3g2302 478 SUPERFAMILY F-box domain 31 87 IPR036047 GO:0005515
Mtr3g2302 478 MobiDBLite consensus disorder prediction 1 21 - -
Mtr3g2302 478 SMART fbox_2 47 87 IPR001810 GO:0005515
Mtr3g2302 478 Pfam Kelch motif 219 267 IPR006652 GO:0005515
Mtr3g2302 478 Pfam Kelch motif 171 216 IPR006652 GO:0005515
Mtr3g2302 478 SUPERFAMILY Kelch motif 104 407 IPR015915 GO:0005515
Mtr3g2302 478 Gene3D - 109 384 IPR015915 GO:0005515
Mtr3g2302 478 Pfam F-box domain 44 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2302 Mtr-Chr3 36702811 36705482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2302 37 265 Miscellaneous Gene Families AT4G33900 26.609 5.12e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2302 - - gmx:100806691 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2302 3 36702811 36705482 Mtr3g2302 3 36702811 36705482 ECH