Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2296 ATGGAAGAAGAAAGCTCCGAATTCATCGACATCAAGCTTTCTTCTCCGGCGAAGAAGCTCCCACTCGATCTTCCTCAAGATCCGCAGCTCAAATCCTGCCGTCGTCTCCGCCGCAGAGGTGACACATGGGTAATTTCTGTTATGGTGTTAATCCAACTAGGGTTCTTCATTGCCACGATGCTCGTCAACGATTGCTTCACCAATTCTCACGGTGATTGCACTTTTCCATCTCTTGGAAGGTTCTCGTTTCAGCCTCTCGCTGAAAATCCTCTGTTAGGTCCTTCCATGTCAAAGTTGGATGAAATGGGAGCACTACAAAAGAACTTTTTGACGGAACGTCATCAAACTTGGAGACTTTTCACGTTTCCATTTTTACATGCAGGACTCTTCCATCTTGTGATCAATCTCTGCAGTGTCATCTATGTTGGAATTCGCCTAGAGCAGGAGTTTGGGCCATTAAGGATTGGTATAGTCTATATACTATCTGCTTTTGTGGGTGCCTTAATGGCATCTCTTTTTCTTCAAAACATCCCTGTTGTTGGTTCTTCTGGTGCTCTATTTGGATTACTAGGAGCATTGCTTTCAGAACTTGTTTGGAACTGGAAATATCATACCAAAAAGATTTCAGAAGTAGCATCTTTCGTCTTTATCTTTGTGTGCAACTTCCTCCTTGGTTTTCTGCCTTATGTAGACAATTTTTCAAGCATTGGAGGTTTTATATCAGGATTCCTCCTTGGAACTGTTCTTCTATTCGCACCTCAGTTCCAACAGGTAACTCCAAGTAAAGGAGATCAAATTGATTATGATCTCAAAAGTTACATCAAATTGAAGCTCAAGCAAAAGCTAGACAGACCAGTTTCTAGGATTGTTTCTCTTATCCTCTTCACTCTGCTATTGGCTGGTTGTCTTCTTGCAGTTCTTTATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTTGACTGTATCCCTTTCACAAGCTGGCACTGCAAAGACAGAGAAACCTTTTGTGAGACAATGGTGAGTAATGCTCATTTGACGATGACATGTTTGGGGAATGGCAACTTCAAGGTCTTTCACTACACCAACATCTCCCGAGCAAGGATTAATGATTTGTGCAATTTAATATGTTGA 1140 0.4167 MEEESSEFIDIKLSSPAKKLPLDLPQDPQLKSCRRLRRRGDTWVISVMVLIQLGFFIATMLVNDCFTNSHGDCTFPSLGRFSFQPLAENPLLGPSMSKLDEMGALQKNFLTERHQTWRLFTFPFLHAGLFHLVINLCSVIYVGIRLEQEFGPLRIGIVYILSAFVGALMASLFLQNIPVVGSSGALFGLLGALLSELVWNWKYHTKKISEVASFVFIFVCNFLLGFLPYVDNFSSIGGFISGFLLGTVLLFAPQFQQVTPSKGDQIDYDLKSYIKLKLKQKLDRPVSRIVSLILFTLLLAGCLLAVLYGININSYCTWCPYVDCIPFTSWHCKDRETFCETMVSNAHLTMTCLGNGNFKVFHYTNISRARINDLCNLIC* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2296 379 SUPERFAMILY Rhomboid-like 40 254 IPR035952 -
Mtr3g2296 379 Pfam Rhomboid family 112 250 IPR022764 GO:0004252|GO:0016021
Mtr3g2296 379 Gene3D - 37 252 IPR035952 -
Mtr3g2296 379 PANTHER RHOMBOID-RELATED 28 379 IPR002610 GO:0004252|GO:0006508|GO:0016021
Mtr3g2296 379 PANTHER RHOMBOID-LIKE PROTEIN 8 28 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2296 Mtr-Chr3 36651831 36655106 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2296 - - gmx:100793747 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2296 3 36651831 36655106 Mtr3g2296 3 36651831 36655106 ECH