Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2290 ATGAAGACTCGTGCTTCTACCAAAATCTCTGCTAAATGGATTCCAATTTTCTCTGTTTTTTCCTTCCTTATTGGCATGCTCATCACAACTAGGATGTGGGAGCAACCTGAATCAAATGGTGTGATAATTTCTAAGCATCAACGTGATCAACAAGAACTTCAAGTGATCTCTGAGGATTGTGATGTGACAAAAAAGAAGCAGGAAAAGCCTAAGGATGAAATGAATGAATTGTATAAAACACATGAAGCTATTCAGGCCCTAGACAAGCAAGTTTCCATGTTGCAAATGGAATTAGCAGCAGCTAGAAGTTCTCGCAAAAAGAACTCAACTGGCTCGGCCACCAATTCCAGTGAAGGTGCTTCCAAGAAGAAGAAGGCATTTATAGTGATAGGTATAAACACAGCTTTCAGTAGCAGGAAGAGACGCGATTCGGTTAGAGAAACGTGGATGCCTCAAGGTGAACAACTTCTTCAATTGGAACGGGAGAAAGGAATTGTTATCAGATTCATGATTGGGCACAGTGCAACTTCCAACAGCATTCTAGATCGTGCTATTGATTCAGAAGAAGCTCAACACAAAGACTTCCTTCGCCTGCAACATGTTGAAGGATATCATGAGCTGTCTGCAAAGACAAAGATTTTCTTTTCTACCGCAGTTGGATTATGGGATGCTGATTTCTATGTCAAAGTAGATGACGATGTTCATGTCAATTTAGGTGTCTTGGCAGCAACCCTTGCCCGTCATCGTTCAAAACCCAGGGTCTACATTGGGTGTATGAAATCTGGACCTGTTTTATCTCGAAAGGATGTCAAGTACCATGAACCTGAATTTTGGAAGTTTGGAGAAGAGGGAAACAAATACTTTCGACATGCAACCGGGCAGATATATGCAATCTCTAAGGATTTGGCCACTTACATTTCCATTAACCAGCCGATTTTACACAAATATGCGAATGAAGACGTTTCACTTGGTTCATGGTTCATTGGTCTTGAAGTTGAGCACATTGATGACCGCAGTATGTGCTGTGGAACCCCTCCAGACTGTGAGTGGAAGGCACAGGCAGGTAACATATGTGTTGCGTCTTTTGATTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATATGTGCACTCAAAATGTGGTGAAGGAGATGGAGCTGTTTGGAGTGCTTTGTTTTAG 1188 0.42 MKTRASTKISAKWIPIFSVFSFLIGMLITTRMWEQPESNGVIISKHQRDQQELQVISEDCDVTKKKQEKPKDEMNELYKTHEAIQALDKQVSMLQMELAAARSSRKKNSTGSATNSSEGASKKKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLQHVEGYHELSAKTKIFFSTAVGLWDADFYVKVDDDVHVNLGVLAATLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2290 395 Pfam Domain of unknown function (DUF4094) 10 104 IPR025298 -
Mtr3g2290 395 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 387 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr3g2290 395 MobiDBLite consensus disorder prediction 102 119 - -
Mtr3g2290 395 Pfam Galactosyltransferase 140 337 IPR002659 GO:0006486|GO:0016020|GO:0016758
Mtr3g2290 395 MobiDBLite consensus disorder prediction 98 119 - -
Mtr3g2290 395 Coils Coil 84 104 - -
Mtr3g2290 395 Gene3D - 115 341 - -
Mtr3g2290 395 PANTHER HEXOSYLTRANSFERASE 8 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2290 Mtr-Chr3 36576339 36580021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2290 1 395 Glycosyltransferase AT1G77810 71.285 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2290 K20855 - gmx:100776715 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2290 3 36576339 36580021 Mtr3g2290 3 36576339 36580021 ECH