Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2273 ATGGTATTACTGAACTCTGCGTCAACAGCATCGTTGTTATTAGCCACCACAAGGAGGGTTTACAACTACCATCTTTCTACATATACACTCATGGCATCCTCAGCTGTGGATTGCAGTTTGTTGGTTCTATGTGGCAAATCACTCGCAGAGAATGAAACTGCTATAGCTATTAAGACCAATAACACTCTCAAGCTCCCTGACAAGAAAGAACTATCCATTATTTTACATTCAGAGTTCAATAAAAGTGTTATACAACGACAATCCTTCCAATTTAGTTCATTCATGAATTCTCTTTCTACCAATCAATTTGGCAGGCTTCTCATATGGTCTCCTGAGTTAACTTCGACACATGATGTCGTTTCACACAACTTTTGTGAGCTTCCGGTTGGTACAGTATGTGTTGGTGATATCCAGAACAAGGGAAGAGGTCGGTCAAAGAATGCCTGGGAGTCTCCATTAGGTTGCCTGATGTTTTCTTTTACTCTGCAAATGGAGGATGGACGGATCGTTCCTTTAGTTCAGTATGTTGTTTCCTTGGCTATCACAGAGGCAATCAAGGATATCTGTGACAAAAATGGATTGCCGTGCGTTGATGTTAAAATCAAGTGGCCAAATGATCTTTACTTAAATGGATTTAAAGTTGGAGGCATTCTTTGCACCTCAACGTATAGATCAAAGAAGTTCAATATCAGTGCAGGAATAGGATTGAATGTCAATAATGAGAAGCCAACAACATCCTTAAATACAGTTCTAAGAGAATTGTCTGTGGGAGCTTACCAATTTCAAAGAGAAGATGTTCTGGCAGCCTTTTTTAACAAATTTGAGAAGTTTTTCGATCTATTTTTGAATCAAGGATTTCAAACCCTAGAGGAACTATATTACAAGACATGGTTGCACAGTGGACAGAGAGTTATTGTACAAGAAAAGAACGAGGAGAAAGTAGTCGAACATGCGGTAACTATTCAGGGTTTGACGTCCTCGGGATATTTGTTGGCAGTCGGTGATGACAACCAAATGTGTGAGCTCCACCCTGATGGTAATAGCTTTGACTTTTTCAAAGGACTGGTCAGAAGGAAACTTGACTGA 1086 0.3978 MVLLNSASTASLLLATTRRVYNYHLSTYTLMASSAVDCSLLVLCGKSLAENETAIAIKTNNTLKLPDKKELSIILHSEFNKSVIQRQSFQFSSFMNSLSTNQFGRLLIWSPELTSTHDVVSHNFCELPVGTVCVGDIQNKGRGRSKNAWESPLGCLMFSFTLQMEDGRIVPLVQYVVSLAITEAIKDICDKNGLPCVDVKIKWPNDLYLNGFKVGGILCTSTYRSKKFNISAGIGLNVNNEKPTTSLNTVLRELSVGAYQFQREDVLAAFFNKFEKFFDLFLNQGFQTLEELYYKTWLHSGQRVIVQEKNEEKVVEHAVTIQGLTSSGYLLAVGDDNQMCELHPDGNSFDFFKGLVRRKLD* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2273 361 Pfam Biotin/lipoate A/B protein ligase family 114 237 IPR004143 GO:0036211
Mtr3g2273 361 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 92 282 IPR004143 GO:0036211
Mtr3g2273 361 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 46 359 - -
Mtr3g2273 361 CDD BPL 107 281 IPR004408 GO:0004077|GO:0036211
Mtr3g2273 361 PANTHER BIOTIN PROTEIN LIGASE 46 359 - -
Mtr3g2273 361 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 109 332 IPR004408 GO:0004077|GO:0036211
Mtr3g2273 361 Gene3D Bira Bifunctional Protein; Domain 2 95 296 IPR045864 -
Mtr3g2273 361 SUPERFAMILY Class II aaRS and biotin synthetases 94 297 IPR045864 -
Mtr3g2273 361 Pfam Biotin protein ligase C terminal domain 299 354 IPR003142 GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2273 K01942 - gmx:100818402 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2273 3 36354664 36363672 Mtr3g2273 3 36354664 36363672 ECH