Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2262 ATGGAAAAGACACAAAGAGTGCAAAATGTAGCTTCATTATCGAATGAAACAATTCCAGCAGAGTTTGTTAGGTCCGAAAAAGAACAACCTGGAAACTCAACTGTTAGAGGGACCCAATTAGAGGTTCCTCTAATTGATTTTAGTAACCCAGATGAGGAAAAAGTGTTACATGAAATCATAGATGCGAGTTGTAAATGGGGAATGTTCCAAATTGTTAATCATGAAATACCTACAGAACTTATAACCAAACTTCAAAGTGTTGGAAAAACGTTTTTTGAGTTACCTCAAGAAGAAAAGGAGCAATATGCTAAACCTCCTGATTCTAAATCTATTGAAGGTTATGGATCTAAGCTTGGTAATGATATTGATAACAAGAGAGGTTGGGTTGATCATTTGTTTCATAAGATATGGCCACCTTCGGATATTAACTATCGATTTTGGCCTAAAAATCCTCCTTCTTACAGAGAGATCAACGAGGAATACGGCAAACACCTACATGGGGTTGTAGACAAGTTGTTCAAAAACTTGTCAATAGGGTTAGGGCTTGAAGGTCATGAGCTAAAGGAGTATGCAGGGGGTGATAACATGGTTCACTTGTTAAAGATCAACTATTACCCACCTTGCCCCTGTCCTGATCTTGTTCTTGGTGTTCCAGCTCATTCAGACATGTGTTTTATCACGCTTCTTGTCCCAAATGATGTTCAAGGTCTTCAAGCCTCTAGAGATGGACAATGGTACGATGTTAAGTATGTCCCCTCGGCTTTTGTAATTCACATTGGCGACCAACTGGAGATAATGAGCAATGGAAAATACAAGGCTATATTACACAGAACAACAGTGAGCAAAGATGCAACAAGAATTTCTTGGCCAGTGTTCATAGAACCGCAACCAGAGCAAGAAGTTGGGCCTCACCCAAAACTGGTTAACCAAGACAACCCACCAAAATTCAAGACCAAGAAATACAAAGATTATGCATACTGTAAGCTCAATAAGATCCCTCAGTAA 1005 0.392 MEKTQRVQNVASLSNETIPAEFVRSEKEQPGNSTVRGTQLEVPLIDFSNPDEEKVLHEIIDASCKWGMFQIVNHEIPTELITKLQSVGKTFFELPQEEKEQYAKPPDSKSIEGYGSKLGNDIDNKRGWVDHLFHKIWPPSDINYRFWPKNPPSYREINEEYGKHLHGVVDKLFKNLSIGLGLEGHELKEYAGGDNMVHLLKINYYPPCPCPDLVLGVPAHSDMCFITLLVPNDVQGLQASRDGQWYDVKYVPSAFVIHIGDQLEIMSNGKYKAILHRTTVSKDATRISWPVFIEPQPEQEVGPHPKLVNQDNPPKFKTKKYKDYAYCKLNKIPQ* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2262 334 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 10 331 - -
Mtr3g2262 334 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 196 295 IPR005123 -
Mtr3g2262 334 MobiDBLite consensus disorder prediction 297 316 - -
Mtr3g2262 334 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 149 IPR026992 -
Mtr3g2262 334 Gene3D - 2 332 IPR027443 -
Mtr3g2262 334 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 331 - -
Mtr3g2262 334 SUPERFAMILY Clavaminate synthase-like 5 332 - -
Mtr3g2262 334 Pfam 2OG-Fe(II) oxygenase superfamily 198 295 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2262 Mtr-Chr3 36262918 36265915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2262 38 325 Glycosyltransferase AT5G59530 31.148 1.59e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2262 K05278 - gmx:100816829 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2262 3 36262918 36265915 Mtr3g2262 3 36262918 36265915 ECH