Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2258 ATGAGTGGAAATAGCTGCAACATCAATCACATTCAACACTGCCGCAAATCGATCTACGTCGCCGTTACCGTCATATTTGATCAGAGCACCGCCGCGAGCAGCTCCTTCCTCCAGCAACCACCACGTGCACTACCAATTCCGTCTGGATTGAGGTTTTTCATTTCCACTGTTACTCAAAATCCCAGAGCTCCAATCTTCGGTTTCCACTCTACCATGTCCATCGTTTCAACCGAAAATGAAACCACCTCTGAGAAAATACGTCATCCTTTGCAGGTTGCAAAACAGCTAGAGCAGTTCAAAACAACAATCTTCACTCAAATGAGTATGCTTGCCATCACACATGGTGCTATAAACCTTGGTCAGGGCTTTCCCAACTTTGACGGTCCAGAATTTGTAAAGGAAGCAGCAATTCAAGCAATCAGGGATGGGAATAATCAGTATGCAAGGGGTTTTGGAGTTCCAGATCTCAACATTGCAATTGCTGAGAGATTCAAGAAAGATACTGGACTAATTGTAGATCCTGATAACGAAATTACTGTTACATCTGGTTGCACAGAAGCAATCGCTGCAACTGTATTAGGATTAATAAATCCCGGTGAAGAGGTTATTCTGTTTGCTCCTTTTTATGATTCTTATGGTGCCACTTTATCCATGGCTGGTGCAAATATAAAAAGCATTACTCTGCGCCCTCCAGATTTCGCTGTCCCGATTGATGATTTGAAGTCCACCATCTCAAAGAATACTCGTGCCATTCTTATAAATACCCCTCACAATCCTACCGGAAAGATGTTCACTCGAGAGGAGCTCGATTCTGTTGCATCTCTTTGCATTGAAAATGATGTTCTGGTTTTCACTGATGAAGTGTATCATAAGTTGGCATTCGATATGGAGCACATTTCAATTGCTACTTTGCCTGGAATGTTCGAGCGGACGGTGACAATGAACTCATTGGGGAAGTCATTCTCCTTAACGGGGTGGAAGGTTGGATGGGCCATAGCGCCTCCACACTTAATGTGGGGAGTGCGACAGGCACACACTTATATCGCTTTCTCAATTTCCCATCCTTTGCAGTGTGGGGCTGCAGCAGCACTTAGAGCACCAGATTCTTACTATGTGGAGCTAAAGAGGGACTATATTGCAAAGAGAGCTATTTTGGTTGAAGGGTTGAAGGCTGTTGGGTTCAAGGTATTCCCAACCAATGGAACCTTTTTTGTGCTTGCAGATCACACCCCTTTCGGACATGAAAATGATGTTGCATTTTGTGAATATCTAATTAAGGAGATTGGTGTGGCGGCAATACCTTTAAGTGTATTTTACTTGAATCCAGAAGAGGGAAAGAATCTAGTCAGGTTTACTTTCTGCAAGGACGAGGAAACTATTAAGGCTGCTGTTGAAAGGATGAAGGAGAAGCTTAGTAAATAA 1422 0.4332 MSGNSCNINHIQHCRKSIYVAVTVIFDQSTAASSSFLQQPPRALPIPSGLRFFISTVTQNPRAPIFGFHSTMSIVSTENETTSEKIRHPLQVAKQLEQFKTTIFTQMSMLAITHGAINLGQGFPNFDGPEFVKEAAIQAIRDGNNQYARGFGVPDLNIAIAERFKKDTGLIVDPDNEITVTSGCTEAIAATVLGLINPGEEVILFAPFYDSYGATLSMAGANIKSITLRPPDFAVPIDDLKSTISKNTRAILINTPHNPTGKMFTREELDSVASLCIENDVLVFTDEVYHKLAFDMEHISIATLPGMFERTVTMNSLGKSFSLTGWKVGWAIAPPHLMWGVRQAHTYIAFSISHPLQCGAAAALRAPDSYYVELKRDYIAKRAILVEGLKAVGFKVFPTNGTFFVLADHTPFGHENDVAFCEYLIKEIGVAAIPLSVFYLNPEEGKNLVRFTFCKDEETIKAAVERMKEKLSK* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2258 473 Gene3D Aspartate Aminotransferase, domain 1 106 467 IPR015422 GO:0003824
Mtr3g2258 473 Gene3D - 129 367 IPR015421 GO:0003824
Mtr3g2258 473 CDD AAT_like 117 469 - -
Mtr3g2258 473 Pfam Aminotransferase class I and II 117 466 IPR004839 GO:0009058|GO:0030170
Mtr3g2258 473 PANTHER FI04487P 93 473 - -
Mtr3g2258 473 PANTHER FI04487P 93 473 - -
Mtr3g2258 473 SUPERFAMILY PLP-dependent transferases 92 471 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2258 Mtr-Chr3 36206388 36210288 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2258 K23977 - gmx:100818968 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2258 3 36206388 36210288 Mtr3g2258 3 36206388 36210288 ECH