Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2255 ATGGAAACTCAGAAGAGTCAATCAAAGCTTACAAGAACACAATCTTCACTTCTCAATCTCACTTCTTCACCAACAATTCGATCTTCATCGATTCAAAGCCTTTCTTCCATCAACGATTGTTACTACGACGAAGAAGACGACAAAAACAACAAGAAAATAAAAACCAACAAAAAAATCCAAACCCCAAGAATCGGGTCGACCCGATTAACCACTCCGGTTATCGCCGTTGTTTCATTCGGTTCCCTCGGCGCGTGTTCGTTCTTCTTCTACTTCTCCTTCCTCGGTAGCGACGAGGTTCCAACTTCAGAGAATCTCTTACTCGCTTTGATTTTCATCGCCGTTGCTCTTTACTTCATTTCAAAGAATAAAGGGTTAATCAACTACAGTGTCTCCGTTTTGAAACAGTGGTATGAAATTAACATAAAACGGTTCGGGTTAACAAAAACAGAATCAAAACCGGTTCAATGGTTCATCGGCGGTAGTGGTTCAACGGCAACAACAACGAAGACAGCGATAGAGAAAAAGAAGATAAAAGAAGGTGTAGAGTTTTACAGCAACGGTGATTTTTACGAAGGGGAGTTTCATAAAGGAAGAAGTAACGGAAGTGGTGTGTATAATTACTTTGTGAATGGAAGATATGAAGGTGATTGGGTTGATGGAAGATATGATGGATATGGAATTGAGAGTTGGGCTAGAGGGAGTAGATATAAGGGTCAGTATAGAAAAGGAATGAGACATGGTTATGGTGTTTATAGGTTCTATACTGGTGATTCTTTTTCTGGTGAATGGTGTAATGGTCAAAGTCATGGTATGGGTCTTCAAACTTGTTCTGATGCTAGTACTTATGTTGGGATGTTTAAACATGGTGTTAAACATGGTCTTGGTTGTTACCATTTTAGAAATGGAGATAGATATGCAGGAGAGTATTTTGGAGACAAAATTCATGGATTTGGAGTGTACCATTTTGCTAATGGACATTGTTATGAAGGAGCGTGGCATGAGGGTCGTAGACAAGGTATTGGCTCGTATACCTTTCGAAATGGTGATCGAAGATGTGGTGAATGGGATGCTGGCAACCTCAAGCATCCTATGCCACCTCTAACTGATGTTGTCCTTCGAGCGATTCAGGCTGCTAGGAAAACAGCTGAGAATGCGATAAACCTTAAGCGGGTCGAAGACCAGGTTAACAATGCAGTGATCGCTGCAAACAAAGCCGCCACTGCTGCTAGAGTTGCTGCTGTGAAGGCTGTTCAGAACAGGATGGATGGAAAATTTTGTGAAACTTTTGTATGA 1293 0.4122 METQKSQSKLTRTQSSLLNLTSSPTIRSSSIQSLSSINDCYYDEEDDKNNKKIKTNKKIQTPRIGSTRLTTPVIAVVSFGSLGACSFFFYFSFLGSDEVPTSENLLLALIFIAVALYFISKNKGLINYSVSVLKQWYEINIKRFGLTKTESKPVQWFIGGSGSTATTTKTAIEKKKIKEGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWVDGRYDGYGIESWARGSRYKGQYRKGMRHGYGVYRFYTGDSFSGEWCNGQSHGMGLQTCSDASTYVGMFKHGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHEGRRQGIGSYTFRNGDRRCGEWDAGNLKHPMPPLTDVVLRAIQAARKTAENAINLKRVEDQVNNAVIAANKAATAARVAAVKAVQNRMDGKFCETFV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2255 430 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 21 424 - -
Mtr3g2255 430 SMART morn 257 278 IPR003409 -
Mtr3g2255 430 SMART morn 188 210 IPR003409 -
Mtr3g2255 430 SMART morn 303 324 IPR003409 -
Mtr3g2255 430 SMART morn 280 301 IPR003409 -
Mtr3g2255 430 SMART morn 211 232 IPR003409 -
Mtr3g2255 430 SMART morn 326 347 IPR003409 -
Mtr3g2255 430 SMART morn 234 255 IPR003409 -
Mtr3g2255 430 Pfam MORN repeat 259 278 IPR003409 -
Mtr3g2255 430 Pfam MORN repeat 305 326 IPR003409 -
Mtr3g2255 430 Pfam MORN repeat 213 235 IPR003409 -
Mtr3g2255 430 Pfam MORN repeat 328 350 IPR003409 -
Mtr3g2255 430 Pfam MORN repeat 190 207 IPR003409 -
Mtr3g2255 430 Pfam MORN repeat 236 257 IPR003409 -
Mtr3g2255 430 Pfam MORN repeat 282 304 IPR003409 -
Mtr3g2255 430 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 278 359 - -
Mtr3g2255 430 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 184 289 - -
Mtr3g2255 430 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 21 424 - -
Mtr3g2255 430 Gene3D - 220 264 - -
Mtr3g2255 430 Gene3D - 265 310 - -
Mtr3g2255 430 Gene3D - 311 370 - -
Mtr3g2255 430 Gene3D - 173 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2255 Mtr-Chr3 36185894 36188076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2255 185 360 Acyl Lipid Metabolism Gene Families AT1G21980 35.227 1.48e-28 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2255 - - jre:108988356 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2255 3 36185894 36188076 Mtr3g2255 3 36185894 36188076 ECH