Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2245 ATGGCAGAAGATGGAACGAAGAAGATGAATGACGATGTCGACGTGGTTCAGTCTCAGATTGAAAATGCGATGCGCTCTCGCGTTTCTCACTTCAAGCAACAAGCCGATTCTTTGACATTTGCAAGTGTTCGTAGATTGCTCGAGAAAGATTTAGGGTTTGACGAGTTTTCTTTGGATTCTCACAAAAAATTTATCAAACAATCTTTAGACAAGTGCTTAGGAGAGGCTGGTGATGACGATGATGCCACAAAGATGTCTGAGGAGGACGGGGAAAAAGGTGAAAGTACACAAGAGACTGAAGGACAGAAGGAGGAACATCAATCTAAAGATGAAAAGGATCTCCCTGAAGATGAGGAGAAAATGGAAGATTCTCCGGTATTAGGTCTGCTTAAAGAACAAAAGGGGGGTAAACAAGAAACCAAGATAGCAGAAGGCAATGGGAAAAAAATAGTTCCAAATGAGAACGTAATTAAGAAAGCTATTAAAAAAAGATCCTCATACCTCAAGGCTAATGCAGAAAATGTAACTTTGGGTAGTCTTCGCCGATTATTGGAGGAAGATCTTAAACTTGATAAATTTTCTCTGGATCCCTTTAAGAAGTTTATAAGTAAAGAGCTTGACGAGGTATTAATGTCTTCTGAAGTTCCGGAACCTGCAGAAAGGGCTAAGAAAATTGTTAAGAAGAAACCTGATACCAAAGTAACTAAAAAGGTCAGTGCTGAAGATAACTCTGATACTTCAGATGAAGAGAGTGAAGGGGAAGATAATGAGGAAGATGAAGTCAAACCTAGAAAAAAAAGTGTTCCAAAAGGCAAGAAGCAGACTCCTGTTGGATCCAAAAAGCGTAAAGGAGATGACACCAATCTACCCAGCAAGAAAAAGGTCAAGCCTGATAAAGCAGCATCAGAAGACAATAGTGATGCAGGAGACCATGGAAAAAACTCTGAAGATGACCAGTCCCATTCGTCGGCAGAGAATACTACAAAGAAGAAACAAGTTTCAACTCCAACTCCTGTGTACAGTAAACGTGTGGAGCACTTGAAATCTGTTATTAAAGCATGTGGGATGAGTGTTCCTCCCGTTATTTATAAAAAAGTCAAGCAGGTCCCTGAAAACAAACGGGACGGACAACTAATTAAAGAATTGGAGGAAATACTATCTAGAGAAGGCTTGTCTTCAAATCCATCTGAGAAGGAAATCAAAGAGGTAAATAGGAAGAAGGCGCGAGCCAAGGAACTTGAGGGTATTGATATGAGTAATATTGTGTCAAGTACACGTAGAAGGGCGACGATTAGTTTTGTGGCTCCTTCACCACCAAAGCCCAAGATTCCAGTGGAAACTAGTGGCAAAGATACCAAAGGTAGTGATAACGACAACGATGATGAAGGCAAAGAAAATGAAGAGGAGGAAGAAGATGAAGATGAAGAGGAGGAGGATAGCAGTGATGATGATGGAAGTGAGAGTGAAGAATTTAATGCGGATGAAGAGGACAGTGATTGA 1500 0.4053 MAEDGTKKMNDDVDVVQSQIENAMRSRVSHFKQQADSLTFASVRRLLEKDLGFDEFSLDSHKKFIKQSLDKCLGEAGDDDDATKMSEEDGEKGESTQETEGQKEEHQSKDEKDLPEDEEKMEDSPVLGLLKEQKGGKQETKIAEGNGKKIVPNENVIKKAIKKRSSYLKANAENVTLGSLRRLLEEDLKLDKFSLDPFKKFISKELDEVLMSSEVPEPAERAKKIVKKKPDTKVTKKVSAEDNSDTSDEESEGEDNEEDEVKPRKKSVPKGKKQTPVGSKKRKGDDTNLPSKKKVKPDKAASEDNSDAGDHGKNSEDDQSHSSAENTTKKKQVSTPTPVYSKRVEHLKSVIKACGMSVPPVIYKKVKQVPENKRDGQLIKELEEILSREGLSSNPSEKEIKEVNRKKARAKELEGIDMSNIVSSTRRRATISFVAPSPPKPKIPVETSGKDTKGSDNDNDDEGKENEEEEEDEDEEEEDSSDDDGSESEEFNADEEDSD* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2245 499 PANTHER HIRA-INTERACTING PROTEIN 3 1 496 IPR037647 -
Mtr3g2245 499 Coils Coil 459 479 - -
Mtr3g2245 499 MobiDBLite consensus disorder prediction 217 244 - -
Mtr3g2245 499 MobiDBLite consensus disorder prediction 461 499 - -
Mtr3g2245 499 SMART CHZ_2 407 442 IPR019098 -
Mtr3g2245 499 MobiDBLite consensus disorder prediction 425 499 - -
Mtr3g2245 499 MobiDBLite consensus disorder prediction 278 325 - -
Mtr3g2245 499 MobiDBLite consensus disorder prediction 211 342 - -
Mtr3g2245 499 MobiDBLite consensus disorder prediction 73 127 - -
Mtr3g2245 499 MobiDBLite consensus disorder prediction 446 460 - -
Mtr3g2245 499 Pfam Histone chaperone domain CHZ 409 433 IPR019098 -
Mtr3g2245 499 MobiDBLite consensus disorder prediction 73 148 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2245 10 443 EF-hand Containing Proteins AT1G44780 46.453 6.53e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2245 - - gmx:100784738 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2245 3 36075138 36082515 Mtr3g2245 3 36075138 36082515 ECH