Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2239 ATGGAAGAAAACTCTGTTCTTTTCCAATGGAGCGTAATCAGATCTCTCTTGTGTATTCTTCAATGGTGGACTTTCAATGTCACCGTTATCATCGTTAACAAGTGGATCTTTCAGAAATTGGATTTCAAGTTTCCCCTATCAGTATCCTGTGTCCACTTTATCTGCTCAGCCATTGGAGCATATATAGTAATTAAGGTGCTGAAGCTTAAACCACTGATAACTGTTGACCCTGAAGATCGCTGGAAAAGAATCTTTCCGATGTCATTTGTGTTCTGCATTAACATAGTGCTGGGGAATGTGAGTCTACGATACATTCCAGTTTCTTTTATGCAGACAATTAAGTCATTCACACCTGCAACCACTGTTGTTTTGCAATGGCTAGTGTGGAGGAAATATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGGGGGATTCTTCTCACATCGGTAACTGAGATGAGCTTTAATATGTTTGGATTTTGTGCGGCCTTACTTGGCTGTTTGGCTACATCTACAAAGACCATCCTTGCAGAATCTCTTTTGCATGGATACAAATTTGACAGCATAAACACGGTTTATTACATGGCACCTTATGCGACCATGATCTTGGTGCTTCCTGCCATGTTACTTGAAGGCAATGGAGTTCTTGAATGGCTTAATACTCATCCATATCCTTGGTCGGCTCTCATCATTATTTTTAGTTCTGGGGTGCTGGCGTTCTGTCTTAACTTCTCCATTTTTTATGTGATCCACTCCACTACTGCTGTAACATTTAACGTTGCTGGGAACCTTAAGGTTGCAGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGGAACCCAATCTCATATTTAAATGCTGTTGGATGTGCCATCACTCTTGTGGGTTGTACATTCTATGGTTATGTTAGACACTTGCTCTCCCAACAGCCACCAGTTCCAGGAACTCCTCGGACCCCTCGGAGTAAGATGGAGTCGCTTCCACTTGTAAATGATAAATTAGAAAATAAGTTCTAA 1023 0.4115 MEENSVLFQWSVIRSLLCILQWWTFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSAIGAYIVIKVLKLKPLITVDPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVGGILLTSVTEMSFNMFGFCAALLGCLATSTKTILAESLLHGYKFDSINTVYYMAPYATMILVLPAMLLEGNGVLEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVGCAITLVGCTFYGYVRHLLSQQPPVPGTPRTPRSKMESLPLVNDKLENKF* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2239 340 Pfam Triose-phosphate Transporter family 16 302 IPR004853 -
Mtr3g2239 340 Gene3D - 49 158 - -
Mtr3g2239 340 PANTHER SOLUTE CARRIER FAMILY 35 1 327 - -
Mtr3g2239 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 301 - -
Mtr3g2239 340 PANTHER GDP-MANNOSE TRANSPORTER GONST5 1 327 - -
Mtr3g2239 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 69 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2239 Mtr-Chr3 36016026 36022727 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2239 1 339 Organic Solute Cotransporters AT1G77610 87.977 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2239 K15285 - gmx:100809511 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2239 3 36016026 36022727 Mtr3g2239 3 36016026 36022727 ECH