Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2217 ATGTCATCATCTTCCAAAAGTCTGAAAATTGGCATAGTTGGGTTTGGCACCTTTGGCCAATTTTTGGCAAATACAATGATTAAACAAGGTCATACTCTAACTGCAACTAGTAGAACAGATTACTCTCAACTTTGTGATCAAATGGGAATCCATTTCTTCAGGGATATTACAGCATTCCTTGATGCTGATATGGATGTCATATTGTTATGCACATCTATTTCATCACTATCTGAGGTTGTCGGATCGATGCCACTCGCTTGTCTGAAGCGACCAACACTTTTTGTTGATGTTCTTTCAGTCAAAGAGCACCCAAAGAACCTTCTATTAAAGGTATTGCCAGAGGAGTCAGACATACTCTGCACGCACCCAATGTTTGGACCAGTGAGTGGGAAAAACGGCTGGCAAAATCTGACTTTCATGTTTGATAAAGTTCGAATAAAGGATGAAGTTACATGCTCTAAATTTCTTCAAATTTTTGCAAGTGAGGGTTGCAAGATGGTAGAAATGTCATGTGAGGAACATGACAAAGCAGCTGCAAAGAGTCAATTTATCACACACACAATAGGAAGGACATTGGCAGAAATGGATATTAAATCCACTCCTATTGACACCAAGGGCTTTCAAACACTTGTTGAGTTGAAAAAACCTGTCATGGGTTGTAGTTTTGATCTGTATAGTGGATTATTCGTGTACAACAGATTCGCCAGACAAGAGCTGGAAAACCTTGAACATGCTCTACACAAAGTCAAAGAGATGCTCGTCCAAAGGATCGATGAAGGACAGAACCCAGAAAGAACTGAGAGTTGA 807 0.399 MSSSSKSLKIGIVGFGTFGQFLANTMIKQGHTLTATSRTDYSQLCDQMGIHFFRDITAFLDADMDVILLCTSISSLSEVVGSMPLACLKRPTLFVDVLSVKEHPKNLLLKVLPEESDILCTHPMFGPVSGKNGWQNLTFMFDKVRIKDEVTCSKFLQIFASEGCKMVEMSCEEHDKAAAKSQFITHTIGRTLAEMDIKSTPIDTKGFQTLVELKKPVMGCSFDLYSGLFVYNRFARQELENLEHALHKVKEMLVQRIDEGQNPERTES* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2217 268 Gene3D - 1 175 - -
Mtr3g2217 268 PANTHER AROGENATE DEHYDROGENASE-RELATED 5 265 IPR045011 GO:0006571|GO:0033730
Mtr3g2217 268 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 8 268 IPR003099 GO:0004665|GO:0006571|GO:0008977
Mtr3g2217 268 Coils Coil 232 252 - -
Mtr3g2217 268 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 169 IPR036291 -
Mtr3g2217 268 Pfam Prephenate dehydrogenase, nucleotide-binding domain 47 132 IPR046826 -
Mtr3g2217 268 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 170 254 IPR008927 -
Mtr3g2217 268 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 5 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2217 Mtr-Chr3 35830800 35832955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2217 K15227 - gmx:100787362 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2217 3 35830800 35832955 Mtr3g2217 3 35830800 35832955 ECH