Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2216 ATGAAGCCCAACACTCAGGCTTCTTTTTCCACAGGTCCGCCGCACGTGACGTACTTTCACCGCGTAACTGTCTCACGTGCCGTACCTTCCCATACTCATCTTCCACCGCCGAATCAAAAACTCCGACAATTCCGCACCGCCAAACGCCGCCGTGTCAACCTCTCCATCACCGCAGCTAAGAAAACCGAGCACCACGACGGTAACAACGGCGTCGAGCGAACAGAATGTTCTCCAGCACGAAGCAACCGGCGAGGAGTGTTGATGGCGCCGTTTCTAGCCGCCGGAGCTTCGTTTCTTCTCTCTGCTGCGACGACAAGGGCGGCGGAGGAGGAGAAGTTAAAGGAGAATACGGCGCCGGTTGAAGCAACGGTTGTGAAACCGGAGGAGGTGAAGAAGATAGAGGAGGAAGTGATAACGTCGAGGATTTACGACGCGACGGCAATAGGTGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAAGTGTGGGAGAAGTTGATGAATGCTAGAGTTGTTTATTTAGGGGAAGCGGAACAAGTTCCGGTTCGAGATGATAAGGAATTGGAGCTTGAGATTGTCAAGAATTTGCATAAGCGTTGTGTTGAAGTTGATAAGCGTTTATCTTTGGCTATTGAAGCTTTTCCTTCTAATCTTCAGGAACCACTTAATCAGTATATGGATAAAAAGATGGATGGAGAAACCTTGAAGTCTTATACAACGCATTGGCCGCCTGAACGATGGCAGGAGTATGAACCTATTCTTAGTTACTGTCGTGAAAATGGAATCCGTCTTGTTGCTTGTGGTACGCCACTGAAGATCTTAAGGACCGTCCAAGCAGAAGGAATTAGCGGGCTAACAAAGGCTGAACGTAAATTATATGCACCTCCAGCCGGTTCAGGCTTCATATCAGGCTTTTCTTCTATGTCACGTAGATATTCAGCTGACAGTACTCCGAATCTGTCGTTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCTAGAGTGGTTGACGAGTATACTATGTCCCAGACCATCTTACAAAATATGCTTGATGGAGGGGCTACCGGTATGTTGATAGTTGTGACTGGTGCAAGCCATGTCACATATGGAGCTAGAGGAACTGGAGTGCCTGCAAGAATTTCTAGAAAATTACAAAAGAAAAATCAAGTAGTTATATTACTTGACCCAGAAAGACAGTTCATTCGCAGTGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCCGCCAGACCCTGTAGCAGAAATTGCTTTGACCGGGTTGAGATTGCTCGGGTTATGAATGCTGCCGGGCAGAGACGGGATGCCCTCCCACAGGATCTCCAAAAGGGAATTGATCTTGGTTTAGTATCACCGGAGGTATTGCAGAACTTCTTTGATCTAGAGAAATATCCTCTGCTTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAGTTCTTGCAGAGACTAGCAATAGAAGAAGGAATATCAGTAACAACTACATTATTAGCACAGTATCAGAAGCGGAAAGAAAACTTCTTTCAAGAACTTGACTATGTTATTACGGACACTGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTATCATTCCTTTCCTATGCTGATGAGACAATTGCGCCTGATAACATTAGTTCTCTAATAGGACTTCTTGGCTCCATCCCTGACAATGCATTTCAAAAGAACCCAGTGGGGACAAATTGGAATCTCAATCATCGAATTGCATCAGTTGTATTTGGTGGTCTAAAACTCGCTGGTGTTGGATTTATTTCGAGTATTGGAGCTGTTGCTTCATCAAATTCTCTGTTTGCAGTTCGTAAGTTTCTTAATCCAGCAATCATCACTAACAAACAGATTGCAAGGTCACCGATACTCAAAACAGCAGTTGTTTATGCACTTTTTCTTGGAATATCTGCAAATCTCCGTTATCAGATAATTGCTGGGGTAGTGGAGCATCGGATTTCTGATCAGTTTGCTTCCCAAACATTTCTTGTAAATATGCTATCTTTTGTATCACGGACAATCAATTCTTACTGGGGAACGCAGCAATGGATTGACCTTGCACGCTCTACCGGACTGCAAGTTAGAAAGACCGAGTCACCCGAGCCACCTACATCAGATTCTCCAAATCAAGCTGCAATCTTATGCGACTCTACCGGACTGCAAGTTAGAGAGACCGAGTCACCTGAGCCACCTTCATCAGATTCGCCAAATCAAACTGCAATCTTATGCAACGAAGCAGAAGAAGCGAGCATCGATGACATTAAAAGTGAATGA 2343 0.452 MKPNTQASFSTGPPHVTYFHRVTVSRAVPSHTHLPPPNQKLRQFRTAKRRRVNLSITAAKKTEHHDGNNGVERTECSPARSNRRGVLMAPFLAAGASFLLSAATTRAAEEEKLKENTAPVEATVVKPEEVKKIEEEVITSRIYDATAIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLHKRCVEVDKRLSLAIEAFPSNLQEPLNQYMDKKMDGETLKSYTTHWPPERWQEYEPILSYCRENGIRLVACGTPLKILRTVQAEGISGLTKAERKLYAPPAGSGFISGFSSMSRRYSADSTPNLSFPFGPSSYLSAQARVVDEYTMSQTILQNMLDGGATGMLIVVTGASHVTYGARGTGVPARISRKLQKKNQVVILLDPERQFIRSEGEVPVADFLWYSAARPCSRNCFDRVEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEKYPLLSELTHRFQGFRERLLADPKFLQRLAIEEGISVTTTLLAQYQKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADETIAPDNISSLIGLLGSIPDNAFQKNPVGTNWNLNHRIASVVFGGLKLAGVGFISSIGAVASSNSLFAVRKFLNPAIITNKQIARSPILKTAVVYALFLGISANLRYQIIAGVVEHRISDQFASQTFLVNMLSFVSRTINSYWGTQQWIDLARSTGLQVRKTESPEPPTSDSPNQAAILCDSTGLQVRETESPEPPSSDSPNQTAILCNEAEEASIDDIKSE* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2216 780 Pfam Protein RETICULATA-related 487 671 IPR021825 -
Mtr3g2216 780 SUPERFAMILY EreA/ChaN-like 160 416 - -
Mtr3g2216 780 Pfam Haem-binding uptake, Tiki superfamily, ChaN 161 380 IPR007314 -
Mtr3g2216 780 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 38 740 - -
Mtr3g2216 780 MobiDBLite consensus disorder prediction 741 762 - -
Mtr3g2216 780 Gene3D - 139 419 - -
Mtr3g2216 780 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 38 740 - -
Mtr3g2216 780 CDD ChanN-like 169 393 IPR007314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2216 Mtr-Chr3 35823613 35830320 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2216 - - mtr:MTR_3g071970 1492.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2216 3 35823613 35830320 Mtr3g2216 3 35823613 35830320 ECH