Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2215 ATGGATTCCTCCGCTGCCATTCGATCCTTTCACTATCCCATAGGTACTATATCCCATGTGCGATCCTCCATTGAGAGGGCAGCTGTAGTTCCCTGCCATAAAATCAGATGGAACTCTAATAGAGGGAAGAAGGCATTGGTTTCGTGTGCAAAAGCAGTTGAAGCTATCAACACAACCAAGTCTGATGCTTCTTTGGACAGCACTCAACAAGACAAATTAGAGAAAAAGCCATTGCAAACTGCTACTTTTCCTGATGGATTTGAGGCTTTGATATTAGATGTCTGTGACGAGACTGAAATCGCTGAACTGAAATTAAAGGTTGGTGAGTTTGAGATGCATCTTAAGCGTAACATAGGAGCAACAAAAGCTCCATTGTCTAACATTTCACCAACTACACCACCACCTATTCCAAGCAAACCTATGGATGAATCAGCGCCGACTACCGCACAGCCATTGCCACCAACATCATCTTCAGAAAAAACCAACCCATTTGCAAATGTTTCCTCACAAAAATCATCAAAGTTAATAGCATTGGAGGCTTCTGGTACCAGTACATACGCATTAGTATCTTCTCCTACGGTTGGCTCATTCCGAAGAGGTAGAACAGTTAAAGGGCAGAAGCATCCTCCCATCTGTAAAGAGGGTGATGTAATCAGAGAAGGGCAAGTGATAGGGTATTTGGATCAGTTTGGGGTTGGGGCCGGAATTCCCATTAAGTCAGATGTGGCTGGAGAAGTGTTAAAGCTACTTCTTGAGGAGGGAGATCCTGTTGGTTTTGGAGATCCCATTCTTGCCGTCTTGCCATCATTCCATGACATTAAGTGA 825 0.4388 MDSSAAIRSFHYPIGTISHVRSSIERAAVVPCHKIRWNSNRGKKALVSCAKAVEAINTTKSDASLDSTQQDKLEKKPLQTATFPDGFEALILDVCDETEIAELKLKVGEFEMHLKRNIGATKAPLSNISPTTPPPIPSKPMDESAPTTAQPLPPTSSSEKTNPFANVSSQKSSKLIALEASGTSTYALVSSPTVGSFRRGRTVKGQKHPPICKEGDVIREGQVIGYLDQFGVGAGIPIKSDVAGEVLKLLLEEGDPVGFGDPILAVLPSFHDIK* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2215 274 PANTHER BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN 1 274 - -
Mtr3g2215 274 Gene3D - 185 266 - -
Mtr3g2215 274 MobiDBLite consensus disorder prediction 143 167 - -
Mtr3g2215 274 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 1 274 - -
Mtr3g2215 274 SUPERFAMILY Single hybrid motif 183 265 IPR011053 -
Mtr3g2215 274 Pfam Biotin-requiring enzyme 203 264 IPR000089 -
Mtr3g2215 274 MobiDBLite consensus disorder prediction 123 167 - -
Mtr3g2215 274 CDD biotinyl_domain 189 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2215 Mtr-Chr3 35816022 35822885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2215 183 268 Acyl Lipid Metabolism Gene Families AT5G15530 27.907 1.96e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2215 - - gmx:100792471 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2215 3 35816022 35822885 Mtr3g2215 3 35816022 35822885 ECH