Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2213 ATGGAGAGTGTTAAAACCAATTCCAAATACTCATCCATCTTAATAGCTATTTTTGTTCTCTCATCTTTTGCATTGGCTTTAGCAAATCCCAAAACTCACGAGCATGAGTTTGTTGTTGAAGCAACTCCAGTGAAGAGGCTGTGCAAAACACACAACACCATAACTGTGAATGGGCAATACCCTGGTCCAACCCTAGAAATCAACAATGGAGACACTTTGGTTGTAAAAGTCACTAACAAAGCTCGTTACAATGTCACCATTCATTGGCATGGTGTTCGACAAATGAGGACAGGATGGGCAGATGGTCCTGAATTTGTGACTCAATGTCCCATTCGTCCTGGAGGGAGTTACACCTACCGTTTCACTGTTAATGGACAAGAAGGGACACTTTGGTGGCATGCTCATAGCTCATGGTTAAGGGCCACTGTTTATGGTGCTTTAATCATTCGTCCTAGGGAAGGAGAGCCCTACCCTTTTCCTAAGCCTAACCACGAGACATCCATTCTTTTAGGGGAATGGTGGGATGGAAATCCCATAGATGTTGTGAGGCAGGCTCAAAGAACTGGAGCAGCACCAAATATATCTGATGCATACACTATCAATGGTCAACCTGGTGACCTTTACAAGTGCTCTACCAAAGGCACAACAATTATTCCAATACATTCCGGAGAAACAAACCTCGTCAGAGTGATCAATGCGGCACTCAACCAACCACTTTTCTTCACAATTGCCAACCACAAACTAACCGTGGTTGGCGCAGATGCCTCTTACGTTAAACCCTTCACCACCAACATCCTCATGTTAGGACCCGGCCAAACCACCGATGTCTTAATACACGCAAACCAACCACCTTCCAAATACTACATAGCTGCACGCGCCTATCAATCCGCCCAAAATGCACCGTTCGATAACACCACAACCACAGCCATTCTCCAATACCACAATTCAATCAAAACAAAACCAATCATGCCACCACTCCCTTCTTACAATAACACCAACATAGTTACTAAATTTAGTAGAAGCTTTTTTAGTCTGAGAAAAGCTGAAGTCCCGACGGAAATTGATGAAAATCTCTTCTTCACAATTGGTCTAGGACTCAACAATTGCCCGAAAAATTTCAGAAAAAGAAGGTGTCAAGGTCCTATTAACGGAACACGCTTCACTGCGAGCATGAACAATGTCTCTTTTACTCTTCCAAACAATATTTCCATTTTGCAGGCTCATTACCATGGAATCCCTGGAGTTTTTACCACTGATTTTCCAGCAAAACCACCCGTTAAATTCGATTACACCGGCAACGTGAGCCGTTCCCTCTGGCAACCTGTTCCCGGGACTAAAGCTTACAAGTTGAAGTTTGGATCAAGGGTGCAAATTGTGTTGCAAGATACCAGTATTGTTACTCCTGAGAATCACCCAATTCACCTTCATGGGTATGATTTTTACATTGTTGCTGAAGGGTTTGGTAATTTTGATGCTAAGAAAGATACTTCAAAATTCAACCTTGTTGATCCACCTATGAGAAATACAGTTGCTGTACCTGTCAACGGTTGGGCAGTTATCCGGTTTGTTGCGGATAACCCAGGTGCTTGGATTCTGCATTGTCACTTGGATGTTCATATTGGTTGGGGTTTGGCTACTATACTATTGGTAGAGGATGGAGTTGGGAAATTGCAATCAATACAATCACCTCCACAGGACCTGCCTATCTGTTAG 1713 0.4326 MESVKTNSKYSSILIAIFVLSSFALALANPKTHEHEFVVEATPVKRLCKTHNTITVNGQYPGPTLEINNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVNGQEGTLWWHAHSSWLRATVYGALIIRPREGEPYPFPKPNHETSILLGEWWDGNPIDVVRQAQRTGAAPNISDAYTINGQPGDLYKCSTKGTTIIPIHSGETNLVRVINAALNQPLFFTIANHKLTVVGADASYVKPFTTNILMLGPGQTTDVLIHANQPPSKYYIAARAYQSAQNAPFDNTTTTAILQYHNSIKTKPIMPPLPSYNNTNIVTKFSRSFFSLRKAEVPTEIDENLFFTIGLGLNNCPKNFRKRRCQGPINGTRFTASMNNVSFTLPNNISILQAHYHGIPGVFTTDFPAKPPVKFDYTGNVSRSLWQPVPGTKAYKLKFGSRVQIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDAKKDTSKFNLVDPPMRNTVAVPVNGWAVIRFVADNPGAWILHCHLDVHIGWGLATILLVEDGVGKLQSIQSPPQDLPIC* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2213 570 Gene3D - 161 347 IPR008972 -
Mtr3g2213 570 PANTHER LACCASE 9 570 - -
Mtr3g2213 570 Pfam Multicopper oxidase 39 153 IPR011707 GO:0005507
Mtr3g2213 570 Pfam Multicopper oxidase 420 552 IPR011706 GO:0005507|GO:0016491
Mtr3g2213 570 SUPERFAMILY Cupredoxins 159 341 IPR008972 -
Mtr3g2213 570 Gene3D - 16 151 IPR008972 -
Mtr3g2213 570 PANTHER MULTI-COPPER OXIDASE 9 570 IPR045087 -
Mtr3g2213 570 CDD CuRO_1_LCC_plant 35 151 IPR034288 GO:0005507
Mtr3g2213 570 SUPERFAMILY Cupredoxins 28 178 IPR008972 -
Mtr3g2213 570 Pfam Multicopper oxidase 166 315 IPR001117 -
Mtr3g2213 570 TIGRFAM laccase: laccase 31 570 IPR017761 GO:0046274|GO:0048046|GO:0052716
Mtr3g2213 570 CDD CuRO_3_LCC_plant 415 553 IPR034289 GO:0005507
Mtr3g2213 570 Gene3D - 374 570 IPR008972 -
Mtr3g2213 570 ProSitePatterns Multicopper oxidases signature 1. 528 548 IPR033138 -
Mtr3g2213 570 ProSitePatterns Multicopper oxidases signature 2. 533 544 IPR002355 GO:0005507
Mtr3g2213 570 SUPERFAMILY Cupredoxins 350 570 IPR008972 -
Mtr3g2213 570 CDD CuRO_2_LCC_plant 168 313 IPR034285 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2213 Mtr-Chr3 35764670 35769167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2213 K05909 - gmx:547704 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2213 3 35764670 35769167 Mtr5g2859 5 37188585 37192523 ECH
Mtr3g2213 3 35764670 35769167 Mtr3g2213 3 35764670 35769167 ECH
Mtr3g2213 3 35764670 35769167 Mtr5g2859 5 37188585 37192523 PCT