Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2195 ATGGCGAACGTTGATGAACTCTTATCTTCCTCATTCTCAGATATTAACTCATACACCGGCAAAGACCCTCTTCTCCCTTGGCTCCGAGGAATCAAAAAGATGAAAGACACTCTTCCCTCAAAAACCCTCAAGGAAAAACTACCCGAGTTCTTGCAACAATGCGCCAAAACATTCGAGCTCGATCGACGTTACAGAAACGATTTACGTTATCTTCGTGTTTGGCTCCACTTGATGGATTTTGTTGATGACCCGAGTGCCTTGTTGAGAACCATGGAGGTTAATCAAATTGGAACTAAACGGTGTCAATTTTATCAAGCATATGCTCTTTACTACGAGAAGAGTAAGAATTATGATGAGGCAGAGAAAATGTATCATATGGGAGTTAAGAACCTAGCAGAGCCTGTGGATGAACTGCAGAAATCTTATGAACAATTTCTTCAACGCATGAAGCGCAAGAAGAAAATTCAGGAAATGAAAGCTGCTGATAGACGCGTAAAGGCTAAAAATGATGAGAGCAAGAAACTTCGCGGTGATCATACAGTTGTAATCAACAAGTTTGTTGACACTGCCATGGATGGAAAGTCTGAAGCAGAAAATGCATGCCATCATGGACTGGTAGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCAGTGAGCCATTAGAGACTGTTCCTTTGGGCAAGAAATTACATAAGAACAATTCAAAAGAAAATTGCAGTTCAATGAACTTTGAAGTTTTTGTTGATGAAAATTTGGATAAAGAAAATAAACCAAGCGGTTCCGCATCACTTCAGCACAGGAATGAAGGTGGCAAACCTCAACAAGAATCACTCCAGATACATATTGATGATGAAGGACATTCAGAAGGTTCTACTTCATCAGTTTCAAAAGTAAATGGCTTTGTTTTTCCCCGACCTAAGGATGTTCCTTCTGAGAAATCTAGGGATATGGATGCACAAAAATCTCATAATTCAAAGTTCAGAGAAGATACAGTTGTTCGTAGATTTGTTGGTTCTGCCATTTTGGATGAACCAAAGGTGGAAAATGCTTGTCACCACGGTTTAGTAGACCCCACAATCAACATGAAGGAAGCAATGGATGACATAAACAACATGTTTGGGAAGCCAATAGACTTTGTTAGAAAGAAAAGGTCACTGAAGCAAGAGAATGCACCGGAGAACAATAGTGGAAAGGAATTCGGTGGGTTTTCAATCCTTGCCGATGATGATGATGACCTCAAACAGAAACAAGGAGGTAAGCCAATAGATTTTGTTCGGAAAAAAAGATTAATGAAGCAGGAGAAAGCACCGGGGAACAACAGTGGAAAGGAACTCAGTGGGTTTTCGATACTTGCGGATGATGACCTCGAGCAGAAACAACGTCCTCCACTACCAAAATCGCGAGGAAAGTCAAAGGAATCAGATTTATTTGAGCCAACTCTCCACACAAAGGAAGCCATGGATGACATTAACATGATGTTTAATATGCCTCTGGATTTTTAG 1521 0.4037 MANVDELLSSSFSDINSYTGKDPLLPWLRGIKKMKDTLPSKTLKEKLPEFLQQCAKTFELDRRYRNDLRYLRVWLHLMDFVDDPSALLRTMEVNQIGTKRCQFYQAYALYYEKSKNYDEAEKMYHMGVKNLAEPVDELQKSYEQFLQRMKRKKKIQEMKAADRRVKAKNDESKKLRGDHTVVINKFVDTAMDGKSEAENACHHGLVDPTINMKEAMNAINSMFSEPLETVPLGKKLHKNNSKENCSSMNFEVFVDENLDKENKPSGSASLQHRNEGGKPQQESLQIHIDDEGHSEGSTSSVSKVNGFVFPRPKDVPSEKSRDMDAQKSHNSKFREDTVVRRFVGSAILDEPKVENACHHGLVDPTINMKEAMDDINNMFGKPIDFVRKKRSLKQENAPENNSGKEFGGFSILADDDDDLKQKQGGKPIDFVRKKRLMKQEKAPGNNSGKELSGFSILADDDLEQKQRPPLPKSRGKSKESDLFEPTLHTKEAMDDINMMFNMPLDF* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2195 506 Pfam Mad3/BUB1 homology region 1 14 128 IPR013212 -
Mtr3g2195 506 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 159 419 IPR015661 GO:0007094
Mtr3g2195 506 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 425 506 IPR015661 GO:0007094
Mtr3g2195 506 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 160 IPR015661 GO:0007094
Mtr3g2195 506 ProSiteProfiles BUB1 N-terminal domain profile. 11 170 IPR013212 -
Mtr3g2195 506 Gene3D - 10 167 - -
Mtr3g2195 506 PANTHER OS11G0128700 PROTEIN 159 419 - -
Mtr3g2195 506 PANTHER OS11G0128700 PROTEIN 425 506 - -
Mtr3g2195 506 PANTHER OS11G0128700 PROTEIN 4 160 - -
Mtr3g2195 506 MobiDBLite consensus disorder prediction 263 281 - -
Mtr3g2195 506 MobiDBLite consensus disorder prediction 259 330 - -
Mtr3g2195 506 MobiDBLite consensus disorder prediction 460 489 - -
Mtr3g2195 506 MobiDBLite consensus disorder prediction 314 330 - -
Mtr3g2195 506 MobiDBLite consensus disorder prediction 435 489 - -
Mtr3g2195 506 SMART mad3_bub1_i 4 128 IPR013212 -
Mtr3g2195 506 Coils Coil 135 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2195 Mtr-Chr3 35553833 35556676 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2195 - - mtr:MTR_3g071460 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2195 3 35553833 35556676 Mtr3g2195 3 35553833 35556676 ECH