Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2154 ATGTCCACACTTTATTCACCTTCCTCTGCCATGGAAGACACCAATCACCGTTCCAAGAAGAATCAACGCCGCCGTCGTCCCTCCGCCACACCAACAAACAACGACTACTCCGACGTGGAGGATGCTGAAGACGGAGATCCCGAAGCATGGCAGACCCTTAACAAGAGTTTTAGGCAGGTTCAGTCGGTGCTTGACAGGAACAGAGCAATAATTCAGCAGGTGAATGAGAATCAACAATCTAGAATGCCTGATAACATGGTGAAGAACGTGGGTTTGATTCAAGAGCTTAATGGGAATATTTCAAAGGTTGCTTCTCTTTATTCTGATCTCAATTCTGATTTTACTAATATTTGTCACCAGCAACAACGTTCTTCTCATAACCGTGGCAAATGA 393 0.4478 MSTLYSPSSAMEDTNHRSKKNQRRRRPSATPTNNDYSDVEDAEDGDPEAWQTLNKSFRQVQSVLDRNRAIIQQVNENQQSRMPDNMVKNVGLIQELNGNISKVASLYSDLNSDFTNICHQQQRSSHNRGK* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2154 130 MobiDBLite consensus disorder prediction 1 48 - -
Mtr3g2154 130 Pfam Early Flowering 4 domain 45 124 IPR009741 -
Mtr3g2154 130 PANTHER PROTEIN EARLY FLOWERING 4 12 126 - -
Mtr3g2154 130 PANTHER PROTEIN ELF4-LIKE 4 12 126 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2154 Mtr-Chr3 35123660 35124422 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2154 - - gmx:100796686 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2154 3 35123660 35124422 Mtr3g2154 3 35123660 35124422 ECH