Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2150 ATGGCATCGTTATGGCGCGCAGGGACCAAGCTATCTCTACTAGCAACCGCCATCGGCGGCGGCAGTGCAGCGGCGCTCATTGCCACCTCTGACGATCCTGCAACCGCGCTCAAGCTCTCCACAACCATCCCCCGTCGCCTCTTCGACGACGCCGTCACTGCCGCCAACATCGTTTTCGATTATGAATATTCACTACATGGAATTCCGGAAGGGAGTATTGAGAGGGAGAAAGTTAAGCATGAAGTTCACCTCCGTTCCGCGGAAAGACTTCGAGACCTGTGTTTTAAGAATGGAGGGATTTATATAAAGCTTGGACAGCATCTTGGGCAATTGGAATACTTAGTTCCTCAAGAGTATGTTCAGACCATGAGGGAGTCCATGCTAAATAGATGTCCGGTTTCTTCGTATGAACAAATATGTGATGTATTCAAGAAAGAGTTTGGAGCAACACCAGATAAAGTATTTGCCGAGTTTGATCCAGTTCCAATAGCAAGTGCTTCCCTTGCACAAGTTCATGTAGCTCACACACATGATGGCCAAAAAGTTGCTGTTAAGGTCCAACATTCTCACATGACTGAAACTGCGGCTGCTGATCAAGCCACTGTGGAGTTGATTGTGAACACTCTGCATAATTTTTTTCCCAGTTTCGATTATAGGTGGTTGATTGATGAGATTAAAGAGAGTTTACCCCAGGAATTGGACTTCTTAACCGAGGCAAAGAACAGTGAGAGGTGTTTGGAGAACTTCCGCAACTTGTCTCCTCATATTGCAAAATATGTATATGCACCAAAAGTATACTGGGGTCTGAGTTCCTCAAAGTTGCTTACAATGGAATACGTAGATGGTGCTTATGTAAATGATTTGAAGACCATTAAGAAACTAGGGATCCGTCCACACGAGCTTTCAATATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCACGGGTTTGTACACTGCGATCCACATGCTGCTAATATGTTGGTTCGCCCATTGCCTTCCAGCAAAGCTAGCATTCTGGGCTGGAGAAAACCACAGCTGATTCTTTTAGACCATGGACTCTATAAAGAGCTTGACTTCAATACAAGAAATAATTATGCTGCACTATGGAAGGCATTGATATTTTCTGATGCTAATGCAATCAAGGAATACAGTAAAAAGTTGGGTGCTGGGGAGGATTTATATGCAATTTTTGCTGGAGCTCTAACAATGAGACCTTGGAATAAAGTTGTCGACCCATCCATGGATCATTTAGTTATACAGGGAAGTGAGAGTGACCGTTCAGAACTGCAGATGTATGCTTCTGAATATTTCCATGAAATCTCCGAGCTTCTAAGGAGATTACCTCGAGTGATTCTTCTAATGATGAAGACAAATGACTGTTTAAGAGCAGTTAATAATACCCTGACACAGGGATCATTACTGGAGACATCTCTGAAAACATCTTGTATCATTGGAAAGGTTTCTTCCGAGGCTGTCATTGACGCAAGAAGGTCACAAAGCAAGTCAGTTTTAACTTGGTTTAGCATTAAATGGGACAAGATTTTGCTGGAAATACAGCTTTGGAAAATGCAGATGTTCCTGTGGCTTTTACAAGTGAGAAAGGCATTGCCTTGGTCTCACCGAGCATCATAA 1638 0.431 MASLWRAGTKLSLLATAIGGGSAAALIATSDDPATALKLSTTIPRRLFDDAVTAANIVFDYEYSLHGIPEGSIEREKVKHEVHLRSAERLRDLCFKNGGIYIKLGQHLGQLEYLVPQEYVQTMRESMLNRCPVSSYEQICDVFKKEFGATPDKVFAEFDPVPIASASLAQVHVAHTHDGQKVAVKVQHSHMTETAAADQATVELIVNTLHNFFPSFDYRWLIDEIKESLPQELDFLTEAKNSERCLENFRNLSPHIAKYVYAPKVYWGLSSSKLLTMEYVDGAYVNDLKTIKKLGIRPHELSILVSQTFAEMMFKHGFVHCDPHAANMLVRPLPSSKASILGWRKPQLILLDHGLYKELDFNTRNNYAALWKALIFSDANAIKEYSKKLGAGEDLYAIFAGALTMRPWNKVVDPSMDHLVIQGSESDRSELQMYASEYFHEISELLRRLPRVILLMMKTNDCLRAVNNTLTQGSLLETSLKTSCIIGKVSSEAVIDARRSQSKSVLTWFSIKWDKILLEIQLWKMQMFLWLLQVRKALPWSHRAS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2150 545 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
Mtr3g2150 545 PANTHER ABC1 FAMILY PROTEIN 7 539 - -
Mtr3g2150 545 SUPERFAMILY Protein kinase-like (PK-like) 129 331 IPR011009 -
Mtr3g2150 545 CDD ADCK1-like 126 390 IPR045307 -
Mtr3g2150 545 PANTHER OS03G0698350 PROTEIN 7 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2150 Mtr-Chr3 35083439 35091414 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2150 K08869 - gmx:100796182 897.886