Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2148 ATGAGGATGACAGTAGAACCAAGCTACTCTCCAAGTTCAACAACTCCTAAAGAAGAACTCGAATGGCATCAATTACCAAAACACCCTCTCTTCACTACCACCACCACCACACACACCGCCTCCGGTAACTCCGTTTCACGAAACCTACTCGCTTACGACGGTGCCAACCGTCTCTATTTATGGGACTCCAAAAACAACCACCTCCATCGTCTTTCTCTTCGCCTTGGTGATCCTGATCCTACTTCCGTTCTCGCTGCTTCCCCTTCTAAGGTTTTACAAACGGATATTGTGCTTGATTTTGAGGTGAATAGAATCTCTATCAATAGGAATGGAACTGCGATGCTTCTTTTTGGGAATGAAAGACTCTGTGTTATGTATCTCTATGGACGTACTTCCAAGAAGGATGATGTTAACTTGATTTGCAGGACTATTAGTGTTGGTTCTCAAACACATTCGCTTGGAAACAATGATATTCGTGTATTAGAAGCCTCGTGGCACCCTTACAGTGATACCCATTTGGGAATCCTTTCTTCTGACTCAGTTTTTAGGCTTTTCAATCTGGCTGTGGATCTTTTGGAACCAGAGCAAGAATATTATTTACAGCCTGCAGGGCCTGGTAGATCCAGAAATGCCTCCTCAATGTGTCCAGTCGGTTTTTCGTTTGGGGGAGACCACTTGTGGGACAGGTTTAGTGTTTTTGTTGCATTCAGTGATGGGTCTATCTATGTAATTTGCCCTGTTGTTCCATTTGGAAGCCTCTTCCAATGTGAATCTTTATTAGAAATATACAATGACGCACATACATTCGGGCTAATGTCAACCAACTCTGTGGCAACTAGTAATGCAACGTATGCAATCTCCTGGCTAGAAGCAACATTTCCTGAGTTACAGAACCAAGAGATTGAAGGAGACAGCTTATCTTTCTCAAGAGCCCGTGCTTATGCTGTATTTGACGCATCTCTGGTCTTGCAGGGACCTCTGCGAAGAGTAGGTCAGAGTGGAAATGAAGATTCAGTTGGTCGTAGTGCTGAATGTGAGGGTCGCGCAGTTAGTTTTCTCTACAATTCAGTCAGCAAAGACTCTATCTTGGTGACTGCCTGGAGTGGTGGACAATTACAGATAGATGCTCTAGCTGATGAGATCCAACCTGTCTGGAGTGTTGGCAGTCCACCTCGTCTTCGTCTTGATTCCCGCGACGATATTCTTGGCCTTGCTATGATATGTGAGTCAATTGCCTGCAGCCGTATGGAAAAGCTTGACCATAACGCCTGGTTGGGTAATCCGCCTCCTCTGCTGAGACTGGCTATTGTTGATTTGGCTCTGCCACGAAGAGCAGAAAGCGGTTATAATATTTCATTGTTCATTGACACCCTTATGCCAGAGAGAATATATTCCCTTCACGATGGAGGGATTGACTCGATAGTGTTGCATTTTCTTCCATTTACAAGTCAGACAAATGGAAAGGATGATACAATGAGGACACCTTCTGTGCATCCTGTTCTAAATACTTGCCAGAATGGATCCGCTTCAGAGCCTTCAATTTGTGGTTTTGTGTCATTGTCAGATTCATTTGGATATTCCTGGATTGTAGCTGTTACACTTTCTCAAGAATGTGTTGTGCTTGAGATGAAAACTTGGGACCTCTTGCTTCCATTAAGCATTGATATGGAAAAGAAAAACATTCAATCAGTTGGGCAATCAAATGAGAGAGATATACAACCAATAATTAGCAAAGAACTGCTTAGTGGGCCCAAGGAGGTACTTGTGCCTTGGGCCTCTCAAAGTTTACGTGCAGTTGCAGCTGATTCAATTGAAGGCCGGTCAACATTGCATCAGTATTTCAAGCTATTTCATGAAACTTACGTGGAATATGCACATAAGGTGCACCTGGAACTCAAGCATCATGCACCACAATTGAAGAAAATCATTAATGACCAACATACTCGATTAGGTGATGCACATCAGAAACTTTTGAAAGTTGAGGAGAAAGAGCATATATTACAGAAAAGAGTTGATCGTGCAATTCAAATGCACAATTCTTTGGAAGAGCGCTTACAGCATTTAAGGAACTTACCTGGTGCTCACAAAAAACCACTGTCCAAAGCAGAGCGACAGTTTAAGTCTGAACTTGACCACTTCAAGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGAGGCGGTAAGTGCAAGGCTGAGAAGGCACATGCATACTTCGAAAGCTAGTCAGCAACAAAAGAAAATATCAGGGAAGAAAATTAGTGCTGGGGATGATCAGATATCCATACTCAAATCTGCGCTTGAAAAACTTTCAATTGTAAATATTGAAAATTCAAAGAAAGTTAAGATTGTTGAGTCCTCATTGAATAACACAGAAAAAATCAGCGGAGAATCAAGTCTCCCTAGGCTTAAGAACTGTTAG 2421 0.4254 MRMTVEPSYSPSSTTPKEELEWHQLPKHPLFTTTTTTHTASGNSVSRNLLAYDGANRLYLWDSKNNHLHRLSLRLGDPDPTSVLAASPSKVLQTDIVLDFEVNRISINRNGTAMLLFGNERLCVMYLYGRTSKKDDVNLICRTISVGSQTHSLGNNDIRVLEASWHPYSDTHLGILSSDSVFRLFNLAVDLLEPEQEYYLQPAGPGRSRNASSMCPVGFSFGGDHLWDRFSVFVAFSDGSIYVICPVVPFGSLFQCESLLEIYNDAHTFGLMSTNSVATSNATYAISWLEATFPELQNQEIEGDSLSFSRARAYAVFDASLVLQGPLRRVGQSGNEDSVGRSAECEGRAVSFLYNSVSKDSILVTAWSGGQLQIDALADEIQPVWSVGSPPRLRLDSRDDILGLAMICESIACSRMEKLDHNAWLGNPPPLLRLAIVDLALPRRAESGYNISLFIDTLMPERIYSLHDGGIDSIVLHFLPFTSQTNGKDDTMRTPSVHPVLNTCQNGSASEPSICGFVSLSDSFGYSWIVAVTLSQECVVLEMKTWDLLLPLSIDMEKKNIQSVGQSNERDIQPIISKELLSGPKEVLVPWASQSLRAVAADSIEGRSTLHQYFKLFHETYVEYAHKVHLELKHHAPQLKKIINDQHTRLGDAHQKLLKVEEKEHILQKRVDRAIQMHNSLEERLQHLRNLPGAHKKPLSKAERQFKSELDHFKEVELDALHSSVEAVSARLRRHMHTSKASQQQKKISGKKISAGDDQISILKSALEKLSIVNIENSKKVKIVESSLNNTEKISGESSLPRLKNC* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2148 806 MobiDBLite consensus disorder prediction 1 19 - -
Mtr3g2148 806 SUPERFAMILY WD40 repeat-like 43 244 IPR036322 GO:0005515
Mtr3g2148 806 Pfam Nuclear pore component 23 190 IPR019321 -
Mtr3g2148 806 Pfam Nuclear pore component 450 784 IPR019321 -
Mtr3g2148 806 PANTHER NUCLEOPORIN NUP84-RELATED 13 792 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Mtr3g2148 806 Coils Coil 671 691 - -
Mtr3g2148 806 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2148 K14318 - gmx:100801853 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2148 3 35051903 35062411 Mtr3g2148 3 35051903 35062411 ECH